|
THE PLANT CELL, Vol 9, Issue 11 1963-1971, Copyright © 1997 by American Society of Plant Biologists
Aux/IAA Proteins Repress Expression of Reporter Genes Containing Natural and Highly Active Synthetic Auxin Response Elements
T. Ulmasov, J. Murfett, G. Hagen and T. J. Guilfoyle
Department of Biochemistry, University of Missouri, Columbia, Missouri 65211
A highly active synthetic auxin response element (AuxRE), referred to as
DR5, was created by performing site-directed mutations in a natural
composite AuxRE found in the soybean GH3 promoter. DR5 consisted of tandem
direct repeats of 11 bp that included the auxin-responsive TGTCTC element.
The DR5 AuxRE showed greater auxin responsiveness than a natural composite
AuxRE and the GH3 promoter when assayed by transient expression in carrot
protoplasts or in stably transformed Arabidopsis seedlings, and it provides
a useful reporter gene for studying auxin-responsive transcription in
wild-type plants and mutants. An auxin response transcription factor, ARF1,
bound with specificity to the DR5 AuxRE in vitro and interacted with
Aux/IAA proteins in a yeast two-hybrid system. Cotransfection experiments
with natural and synthetic AuxRE reporter genes and effector genes encoding
Aux/IAA proteins showed that overexpression of Aux/IAA proteins in carrot
protoplasts resulted in specific repression of TGTCTC AuxRE reporter gene
expression.
This article has been cited by other articles:

|
 |

|
 |
 
W. Grunewald, M. Karimi, K. Wieczorek, E. Van de Cappelle, E. Wischnitzki, F. Grundler, D. Inze, T. Beeckman, and G. Gheysen
A Role for AtWRKY23 in Feeding Site Establishment of Plant-Parasitic Nematodes
Plant Physiology,
September 1, 2008;
148(1):
358 - 368.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. Muniz, E. G. Minguet, S. K. Singh, E. Pesquet, F. Vera-Sirera, C. L. Moreau-Courtois, J. Carbonell, M. A. Blazquez, and H. Tuominen
ACAULIS5 controls Arabidopsis xylem specification through the prevention of premature cell death
Development,
August 1, 2008;
135(15):
2573 - 2582.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Gallavotti, Y. Yang, R. J. Schmidt, and D. Jackson
The Relationship between Auxin Transport and Maize Branching
Plant Physiology,
August 1, 2008;
147(4):
1913 - 1923.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Flores, C. D. Todd, A. Tovar-Mendez, P. K. Dhanoa, N. Correa-Aragunde, M. E. Hoyos, D. M. Brownfield, R. T. Mullen, L. Lamattina, and J. C. Polacco
Arginase-Negative Mutants of Arabidopsis Exhibit Increased Nitric Oxide Signaling in Root Development
Plant Physiology,
August 1, 2008;
147(4):
1936 - 1946.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Christian, W. B. Hannah, H. Luthen, and A. M. Jones
Identification of auxins by a chemical genomics approach
J. Exp. Bot.,
July 1, 2008;
59(10):
2757 - 2767.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Uehara, Y. Okushima, T. Mimura, M. Tasaka, and H. Fukaki
Domain II Mutations in CRANE/IAA18 Suppress Lateral Root Formation and Affect Shoot Development in Arabidopsis thaliana
Plant Cell Physiol.,
July 1, 2008;
49(7):
1025 - 1038.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
V. Cecchetti, M. M. Altamura, G. Falasca, P. Costantino, and M. Cardarelli
Auxin Regulates Arabidopsis Anther Dehiscence, Pollen Maturation, and Filament Elongation
PLANT CELL,
July 1, 2008;
20(7):
1760 - 1774.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
Y. Yang, R. Xu, C.-j. Ma, A. C. Vlot, D. F. Klessig, and E. Pichersky
Inactive Methyl Indole-3-Acetic Acid Ester Can Be Hydrolyzed and Activated by Several Esterases Belonging to the AtMES Esterase Family of Arabidopsis
Plant Physiology,
July 1, 2008;
147(3):
1034 - 1045.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. G. Dubrovsky, M. Sauer, S. Napsucialy-Mendivil, M. G. Ivanchenko, J. Friml, S. Shishkova, J. Celenza, and E. Benkova
Auxin acts as a local morphogenetic trigger to specify lateral root founder cells
PNAS,
June 24, 2008;
105(25):
8790 - 8794.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. Ringli, L. Bigler, B. M. Kuhn, R.-M. Leiber, A. Diet, D. Santelia, B. Frey, S. Pollmann, and M. Klein
The Modified Flavonol Glycosylation Profile in the Arabidopsis rol1 Mutants Results in Alterations in Plant Growth and Cell Shape Formation
PLANT CELL,
June 1, 2008;
20(6):
1470 - 1481.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
I. Desgagne-Penix and V. M. Sponsel
Expression of gibberellin 20-oxidase1 (AtGA20ox1) in Arabidopsis seedlings with altered auxin status is regulated at multiple levels
J. Exp. Bot.,
May 1, 2008;
59(8):
2057 - 2070.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
R. F. Degenhardt and P. C. Bonham-Smith
Arabidopsis Ribosomal Proteins RPL23aA and RPL23aB Are Differentially Targeted to the Nucleolus and Are Disparately Required for Normal Development
Plant Physiology,
May 1, 2008;
147(1):
128 - 142.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K.-i. Hayashi, X. Tan, N. Zheng, T. Hatate, Y. Kimura, S. Kepinski, and H. Nozaki
Small-molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling
PNAS,
April 8, 2008;
105(14):
5632 - 5637.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Kuderova, I. Urbankova, M. Valkova, J. Malbeck, B. Brzobohaty, D. Nemethova, and J. Hejatko
Effects of Conditional IPT-Dependent Cytokinin Overproduction on Root Architecture of Arabidopsis Seedlings
Plant Cell Physiol.,
April 1, 2008;
49(4):
570 - 582.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Okamoto, S. Tsurumi, K. Shibasaki, Y. Obana, H. Takaji, Y. Oono, and A. Rahman
Genetic Dissection of Hormonal Responses in the Roots of Arabidopsis Grown under Continuous Mechanical Impedance
Plant Physiology,
April 1, 2008;
146(4):
1651 - 1662.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Bainbridge, S. Guyomarc'h, E. Bayer, R. Swarup, M. Bennett, T. Mandel, and C. Kuhlemeier
Auxin influx carriers stabilize phyllotactic patterning
Genes & Dev.,
March 15, 2008;
22(6):
810 - 823.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
H. Szemenyei, M. Hannon, and J. A. Long
TOPLESS Mediates Auxin-Dependent Transcriptional Repression During Arabidopsis Embryogenesis
Science,
March 7, 2008;
319(5868):
1384 - 1386.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. S. Padmanabhan, S. R. Kramer, X. Wang, and J. N. Culver
Tobacco Mosaic Virus Replicase-Auxin/Indole Acetic Acid Protein Interactions: Reprogramming the Auxin Response Pathway To Enhance Virus Infection
J. Virol.,
March 1, 2008;
82(5):
2477 - 2485.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
I. A. Paponov, M. Paponov, W. Teale, M. Menges, S. Chakrabortee, J. A.H. Murray, and K. Palme
Comprehensive Transcriptome Analysis of Auxin Responses in Arabidopsis
Mol Plant,
March 1, 2008;
1(2):
321 - 337.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
R. Tapia-Lopez, B. Garcia-Ponce, J. G. Dubrovsky, A. Garay-Arroyo, R. V. Perez-Ruiz, S.-H. Kim, F. Acevedo, S. Pelaz, and E. R. Alvarez-Buylla
An AGAMOUS-Related MADS-Box Gene, XAL1 (AGL12), Regulates Root Meristem Cell Proliferation and Flowering Transition in Arabidopsis
Plant Physiology,
March 1, 2008;
146(3):
1182 - 1192.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. L. Stone, S. A. Braybrook, S. L. Paula, L. W. Kwong, J. Meuser, J. Pelletier, T.-F. Hsieh, R. L. Fischer, R. B. Goldberg, and J. J. Harada
Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: Implications for somatic embryogenesis
PNAS,
February 26, 2008;
105(8):
3151 - 3156.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
F. Bai and D. A. DeMason
Hormone interactions and regulation of PsPK2::GUS compared with DR5::GUS and PID::GUS in Arabidopsis thaliana
Am. J. Botany,
February 1, 2008;
95(2):
133 - 145.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
B. B. Stone, E. L. Stowe-Evans, R. M. Harper, R. B. Celaya, K. Ljung, G. Sandberg, and E. Liscum
Disruptions in AUX1-Dependent Auxin Influx Alter Hypocotyl Phototropism in Arabidopsis
Mol Plant,
January 1, 2008;
1(1):
129 - 144.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. Sungur, S. Miller, J. Bergholz, R. C. Hoye, R. G. Brisbois, and P. Overvoorde
The Small Molecule 2-Furylacrylic Acid Inhibits Auxin-Mediated Responses in Arabidopsis thaliana
Plant Cell Physiol.,
December 1, 2007;
48(12):
1693 - 1701.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Wang, S.-H. Kwak, Q. Zeng, B. E. Ellis, X.-Y. Chen, J. Schiefelbein, and J.-G. Chen
TRICHOMELESS1 regulates trichome patterning by suppressing GLABRA1 in Arabidopsis
Development,
November 1, 2007;
134(21):
3873 - 3882.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. I. Kim, A. Sharkhuu, J. B. Jin, P. Li, J. C. Jeong, D. Baek, S. Y. Lee, J. J. Blakeslee, A. S. Murphy, H. J. Bohnert, et al.
yucca6, a Dominant Mutation in Arabidopsis, Affects Auxin Accumulation and Auxin-Related Phenotypes
Plant Physiology,
November 1, 2007;
145(3):
722 - 735.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. K. Biswas, C. Ooura, K. Higuchi, Y. Miyazaki, V. Van Nguyen, A. Rahman, H. Uchimiya, T. Kiyosue, T. Koshiba, A. Tanaka, et al.
Genetic Characterization of Mutants Resistant to the Antiauxin p-Chlorophenoxyisobutyric Acid Reveals That AAR3, a Gene Encoding a DCN1-Like Protein, Regulates Responses to the Synthetic Auxin 2,4-Dichlorophenoxyacetic Acid in Arabidopsis Roots
Plant Physiology,
November 1, 2007;
145(3):
773 - 785.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. Bertin, L. A. Weston, T. Huang, G. Jander, T. Owens, J. Meinwald, and F. C. Schroeder
From the Cover: Grass roots chemistry: meta-Tyrosine, an herbicidal nonprotein amino acid
PNAS,
October 23, 2007;
104(43):
16964 - 16969.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. P. Gordon, M. G. Heisler, G. V. Reddy, C. Ohno, P. Das, and E. M. Meyerowitz
Pattern formation during de novo assembly of the Arabidopsis shoot meristem
Development,
October 1, 2007;
134(19):
3539 - 3548.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. Yamaguchi, M. Suzuki, H. Fukaki, M. Morita-Terao, M. Tasaka, and Y. Komeda
CRM1/BIG-Mediated Auxin Action Regulates Arabidopsis Inflorescence Development
Plant Cell Physiol.,
September 1, 2007;
48(9):
1275 - 1290.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Ohashi-Ito and D. C. Bergmann
Regulation of the Arabidopsis root vascular initial population by LONESOME HIGHWAY
Development,
August 15, 2007;
134(16):
2959 - 2968.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Carabelli, M. Possenti, G. Sessa, A. Ciolfi, M. Sassi, G. Morelli, and I. Ruberti
Canopy shade causes a rapid and transient arrest in leaf development through auxin-induced cytokinin oxidase activity
Genes & Dev.,
August 1, 2007;
21(15):
1863 - 1868.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
R. Shin, A. Y. Burch, K. A. Huppert, S. B. Tiwari, A. S. Murphy, T. J. Guilfoyle, and D. P. Schachtman
The Arabidopsis Transcription Factor MYB77 Modulates Auxin Signal Transduction
PLANT CELL,
August 1, 2007;
19(8):
2440 - 2453.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. N. Stepanova, J. Yun, A. V. Likhacheva, and J. M. Alonso
Multilevel Interactions between Ethylene and Auxin in Arabidopsis Roots
PLANT CELL,
July 1, 2007;
19(7):
2169 - 2185.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Ruzicka, K. Ljung, S. Vanneste, R. Podhorska, T. Beeckman, J. Friml, and E. Benkova
Ethylene Regulates Root Growth through Effects on Auxin Biosynthesis and Transport-Dependent Auxin Distribution
PLANT CELL,
July 1, 2007;
19(7):
2197 - 2212.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
X.-J. Yin, S. Volk, K. Ljung, N. Mehlmer, K. Dolezal, F. Ditengou, S. Hanano, S. J. Davis, E. Schmelzer, G. Sandberg, et al.
Ubiquitin Lysine 63 Chain Forming Ligases Regulate Apical Dominance in Arabidopsis
PLANT CELL,
June 1, 2007;
19(6):
1898 - 1911.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
Z.-B. Zhang, G. Yang, F. Arana, Z. Chen, Y. Li, and H.-J. Xia
Arabidopsis Inositol Polyphosphate 6-/3-Kinase (AtIpk2beta) Is Involved in Axillary Shoot Branching via Auxin Signaling
Plant Physiology,
June 1, 2007;
144(2):
942 - 951.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Dreher and J. Callis
Ubiquitin, Hormones and Biotic Stress in Plants
Ann. Bot.,
May 1, 2007;
99(5):
787 - 822.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. C. Goeres, J. M. Van Norman, W. Zhang, N. A. Fauver, M. L. Spencer, and L. E. Sieburth
Components of the Arabidopsis mRNA Decapping Complex Are Required for Early Seedling Development
PLANT CELL,
May 1, 2007;
19(5):
1549 - 1564.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Jain, M. D. Poling, A. S. Karthikeyan, J. J. Blakeslee, W. A. Peer, B. Titapiwatanakun, A. S. Murphy, and K. G. Raghothama
Differential Effects of Sucrose and Auxin on Localized Phosphate Deficiency-Induced Modulation of Different Traits of Root System Architecture in Arabidopsis
Plant Physiology,
May 1, 2007;
144(1):
232 - 247.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. J. Petricka and T. M. Nelson
Arabidopsis Nucleolin Affects Plant Development and Patterning
Plant Physiology,
May 1, 2007;
144(1):
173 - 186.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. M. Schwager, L. I. A. Calderon-Villalobos, E. M.N. Dohmann, B. C. Willige, S. Knierer, C. Nill, and C. Schwechheimer
Characterization of the VIER F-BOX PROTEINE Genes from Arabidopsis Reveals Their Importance for Plant Growth and Development
PLANT CELL,
April 1, 2007;
19(4):
1163 - 1178.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
Y. Yamamoto, N. Kamiya, Y. Morinaka, M. Matsuoka, and T. Sazuka
Auxin Biosynthesis by the YUCCA Genes in Rice
Plant Physiology,
March 1, 2007;
143(3):
1362 - 1371.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
I. De Smet, T. Tetsumura, B. De Rybel, N. F. d. Frey, L. Laplaze, I. Casimiro, R. Swarup, M. Naudts, S. Vanneste, D. Audenaert, et al.
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis
Development,
February 15, 2007;
134(4):
681 - 690.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Ren, K. K. Mandadi, A. L. Boedeker, K. S. Rathore, and T. D. McKnight
Regulation of Telomerase in Arabidopsis by BT2, an Apparent Target of TELOMERASE ACTIVATOR1
PLANT CELL,
January 1, 2007;
19(1):
23 - 31.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
G. Li and H.-W. Xue
Arabidopsis PLD{zeta}2 Regulates Vesicle Trafficking and Is Required for Auxin Response
PLANT CELL,
January 1, 2007;
19(1):
281 - 295.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. A. Long
Plant development: new models and approaches bring progress
Development,
December 1, 2006;
133(23):
4609 - 4612.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Hay, M. Barkoulas, and M. Tsiantis
ASYMMETRIC LEAVES1 and auxin activities converge to repress BREVIPEDICELLUS expression and promote leaf development in Arabidopsis
Development,
October 15, 2006;
133(20):
3955 - 3961.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. M. Alonso-Peral, H. Candela, J. C. del Pozo, A. Martinez-Laborda, M. R. Ponce, and J. L. Micol
The HVE/CAND1 gene is required for the early patterning of leaf venation in Arabidopsis
Development,
October 1, 2006;
133(19):
3755 - 3766.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Megraw, V. Baev, V. Rusinov, S. T. Jensen, K. Kalantidis, and A. G. Hatzigeorgiou
MicroRNA promoter element discovery in Arabidopsis
RNA,
September 1, 2006;
12(9):
1612 - 1619.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
H. Ito and W. M. Gray
A Gain-of-Function Mutation in the Arabidopsis Pleiotropic Drug Resistance Transporter PDR9 Confers Resistance to Auxinic Herbicides
Plant Physiology,
September 1, 2006;
142(1):
63 - 74.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
B. Chow and P. McCourt
Plant hormone receptors: perception is everything
Genes & Dev.,
August 1, 2006;
20(15):
1998 - 2008.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Kessler, B. Townsley, and N. Sinha
L1 Division and Differentiation Patterns Influence Shoot Apical Meristem Maintenance
Plant Physiology,
August 1, 2006;
141(4):
1349 - 1362.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
X. Mo, Q. Zhu, X. Li, J. Li, Q. Zeng, H. Rong, H. Zhang, and P. Wu
The hpa1 Mutant of Arabidopsis Reveals a Crucial Role of Histidine Homeostasis in Root Meristem Maintenance
Plant Physiology,
August 1, 2006;
141(4):
1425 - 1435.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Kankainen, P. Pehkonen, P. Rosenstom, P. Toronen, G. Wong, and L. Holm
POXO: a web-enabled tool series to discover transcription factor binding sites.
Nucleic Acids Res.,
July 1, 2006;
34(Web Server issue):
W534 - W540.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
F. E. Tax and A. Durbak
Meristems in the movies: live imaging as a tool for decoding intercellular signaling in shoot apical meristems.
PLANT CELL,
June 1, 2006;
18(6):
1331 - 1337.
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. E. Sieburth, G. K. Muday, E. J. King, G. Benton, S. Kim, K. E. Metcalf, L. Meyers, E. Seamen, and J. M. Van Norman
SCARFACE Encodes an ARF-GAP That Is Required for Normal Auxin Efflux and Vein Patterning in Arabidopsis
PLANT CELL,
June 1, 2006;
18(6):
1396 - 1411.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Bishopp, A. P. Mahonen, and Y. Helariutta
Signs of change: hormone receptors that regulate plant development.
Development,
May 1, 2006;
133(10):
1857 - 1869.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Paciorek and J. Friml
Auxin signaling
J. Cell Sci.,
April 1, 2006;
119(7):
1199 - 1202.
[Full Text]
| |