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THE PLANT CELL, Vol 9, Issue 8 1317-1326, Copyright © 1997 by American Society of Plant Biologists

RESEARCH ARTICLE

A Deletion in the PHYD Gene of the Arabidopsis Wassilewskija Ecotype Defines a Role for Phytochrome D in Red/Far-Red Light Sensing

M. J. Aukerman, M. Hirschfeld, L. Wester, M. Weaver, T. Clack, R. M. Amasino and R. A. Sharrock
Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706

The PHYD gene of the Wassilewskija (Ws) ecotype of Arabidopsis contains a 14-bp deletion (the phyD-1 mutation) beginning at amino acid 29 of the reading frame, resulting in translation termination at a nonsense codon 138 nucleotides downstream of the deletion end point. Immunoblot analyses showed that Ws lacks phyD but contains normal levels of phyA, phyB, and phyC. By backcrossing into the Ws and Landsberg erecta genetic backgrounds, we constructed sibling pairs of PHYD+ and phyD-1 lines and of phyB- PHYD+ and phyB- phyD- lines. Hypocotyl lengths after growth under white or red light increased sequentially in strains that were B+D+, B+D-, B-D+, and B-D-. In the Ws genetic background, an increase in petiole length, a reduction in cotyledon area and in anthocyanin accumulation in seedling stems, a diminished effect of an end-of-day pulse of far-red light on hypocotyl elongation, and a decrease in the number of rosette leaves at the onset of flowering were also seen sequentially in these lines. Thus, phyD, which is ~80% identical in amino acid sequence to phyB, acts in conjunction with phyB in regulating many shade avoidance responses. The existence of the apparently naturally occurring phyD-1 mutation indicates that phyD is not essential in some natural environments.


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J. José Casal and M. Agustina Mazzella
Conditional Synergism between Cryptochrome 1 and Phytochrome B Is Shown by the Analysis of phyA, phyB, and hy4 Simple, Double, and Triple Mutants in Arabidopsis
Plant Physiology, September 1, 1998; 118(1): 19 - 25.
[Abstract] [Full Text]

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 GeneticsHome page
M. Hirschfeld, J. M. Tepperman, T. Clack, P. H. Quail, and R. A. Sharrock
Coordination of Phytochrome Levels in phyB Mutants of Arabidopsis as Revealed by Apoprotein-Specific Monoclonal Antibodies
Genetics, June 1, 1998; 149(2): 523 - 535.
[Abstract] [Full Text] [PDF]

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 Proc. Natl. Acad. Sci. USAHome page
C. Lin, H. Yang, H. Guo, T. Mockler, J. Chen, and A. R. Cashmore
Enhancement of blue-light sensitivity of Arabidopsis seedlings by a blue light receptor cryptochrome 2
PNAS, March 3, 1998; 95(5): 2686 - 2690.
[Abstract] [Full Text] [PDF]

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 GeneticsHome page
J. W. Reed, R. P. Elumalai, and J. Chory
Suppressors of an Arabidopsis thaliana phyB Mutation Identify Genes That Control Light Signaling and Hypocotyl Elongation
Genetics, March 1, 1998; 148(3): 1295 - 1310.
[Abstract] [Full Text] [PDF]

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 Proc. Natl. Acad. Sci. USAHome page
L. Krall and J. W. Reed
The histidine kinase-related domain participates in phytochrome B function but is dispensable
PNAS, July 5, 2000; 97(14): 8169 - 8174.
[Abstract] [Full Text] [PDF]


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