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Database of Sequences Flanking Ds Insertionsa
| Chromosome 1 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| APETALA1 (AP1) | gi:16161 | 467 |
AP1 | GT3676 |
| near ACS1 locus (Y12776) | gi:2505873 | 17770 |
SGT4034 | |
| NIA1 | gi:22756 | 841 |
NIA1, which encodes nitrate reductase | SGT3811 |
3353 |
NIA1, which encodes nitrate reductase | SGT3878 | ||
| BAC F3F20 | gi:4580365 | 40840 |
SGT4711 | |
| BAC F3I6 | gi:2749918 | 62310 |
SGT669 | |
| BAC F3O9 | gi:4887257 | 24460 |
Similarity to DEAD/DEAH box RNA helicase family | SGT6697 |
| BAC F8K4 | gi:3282170 | 97115 |
Strong similarity to coatamer alpha subunit (HEPCOP) | SGT2025 |
| BAC F9K20 | gi:3766106 | 62970 |
SGT6879 | |
63937 |
Similarity to Arabidopsis HSF30 homolog | SGT4188 | ||
| BAC F10A5 | gi:4662609 | 4105 |
Similarity to TUBULIN BETA-1 | SGT5051 |
8527 |
SGT5129 | |||
56798 |
SGT4222 | |||
| BAC F10B6 | gi:4757662 | 49830 |
SGT5340 | |
| BAC F11M15 | gi:4165340 | 30748 |
Similarity to Arabidopsis AINTEGUMENTA protein | SGT4287 |
97670 |
SGT4435 | |||
| BAC F11P17 | gi:2182289 | 2581 |
Putative amino acid permease | SGT4754 |
| BAC F12F1 | gi:2584827 | 1522 |
SGT4157 | |
55230 |
SGT3444 | |||
| BAC F15K9 | gi:3789706 | 10170 |
SGT3130 | |
| BAC F17L21 | gi:3228389 | 84063 |
Hypothetical protein | SGT10031 |
| BAC F19G10 | gi:2098816 | 22410 |
Similarity to Bacillus subtilis SPORE COAT PROTEIN A | SGT4261 |
40410 |
SGT3196 | |||
| BAC F19P19 | gi:2341023 | 96690 |
IAA17/AXR3 auxin response gene | GT3958 |
| BAC F20D21 | gi:4587641 | 42150 |
Hypothetical protein | SGT1001 |
| BAC F20N2 | gi:3492855 | 102450 |
SGT5517 | |
| BAC F20P5 | gi:2182286 | 43080 |
SGT5519 | |
| BAC F20D23 | gi:5103850 | 11930 |
Hypothetical protein | SGT5565 |
| BAC F21B7 | gi:2618677 | 29385 |
Similarity to protochlorophyllide reductase precusor | SGT5118 |
| BAC F22K20 | gi:2477521 | 14742 |
Highly similar to at EXT1, which encodes extensin | SGT3598 |
83840 |
Homology to peroxidases | SGT3811 | ||
86998 |
SGT4925 | |||
| BAC F22O13 | gi:3063438 | 123141 |
SGT5150 | |
| BAC F23M19 | gi:5091613 | 108 |
SGT6846 | |
80400 |
cDNA clone VBVIH04 | SGT7178 | ||
| BAC F24J5 | gi:5724802 | -160 |
SGT6414 | |
| BAC T1F15 | gi:3108024 | 20897 |
Similarity to mannosyl-oligosaccharide glucosidase | SET1077 |
| BAC T2K10 | gi:4204173 | 20954 |
SGT5323 | |
| BAC T4O12 | gi:5019261 | 34774 |
cDNA clone 48A2T7 | SGT6578 |
93230 |
SGT6546 | |||
| BAC T7A14 | gi:4027862 | ~1050 |
SGT1882 | |
45130 |
EST clones gb: H36249, AA59732 and AA651219 | SGT4805 | ||
| BAC T8F5 | gi:3335331 | 33970 |
SGT6201 | |
| BAC T8K14 | gi:4713943 | 37376 |
Hypothetical protein | SGT6628 |
| BAC T14N5 | gi:3176694 | 10500 |
Similarity to Oryza sativa water stress-induced protein WSI76; EST clone gb: T13944 | SGT5752 |
| BAC T17H3 | gi:5578726 | 12104 |
Hypothetical protein | SGT2908 |
13362 |
Similarity to unknown Arabidopsis proteins | SGT4632 | ||
| BAC T26J12 | gi:2645198 | 21970 |
Putative pectinesterase | SGT6342 |
| BAC T27G7 | gi:6143825 | 61674 |
SGT5038 | |
| YAC yUP8H12 | gi:2358139 | 48990 and 53740 |
Strong
similarity to Arabidopsis peroxidase ATP11a (2 Ds copies) |
SGT4342 |
| YAC YUP8H12R | gi:2494106 | 45510 |
SGT5246 | |
| cosmid g17311 (U53502) | gi:1296310 | 8829 |
SGT1015 | |
| cosmid g8261 (U53501) | gi:1297184 | 4020 |
Chromomethylase CMT1 | SGT6608 |
| Chromosome 2 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| BAC F1O11 | gi:4581138 | 27556 |
SGT5698 | |
| BAC F2I9 | gi:3785968 | 9210 |
Homologous to auxin transport proteins AtPIN1 and AtPIN2 | SGT4961 |
9377 |
Homologous to auxin transport proteins AtPIN1 and AtPIN2 | SGT1708 | ||
62687 |
cDNA clone 118P19T7 putative major latex protein | SGT4665 | ||
65598 |
SGT5683 | |||
72481 |
SGT1873 | |||
75952 |
SGT5591 | |||
82384 |
RGA1 which encodes gibberellin response GRS protein | SGT842 | ||
88220 |
SGT6341 | |||
89569 |
SGT4602 | |||
| BAC F3G5 | gi:4056476 | 37215 |
Hypothetical protein | SGT6369 |
| BAC F3N11 | gi:4003353 | 16500 |
SGT5129 | |
| BAC F4I18 | gi:3386593 | 78170 |
SGT5304 | |
| BAC F4L23 | gi:2583106 | 4635 |
Putative surface protein | SGT6202 |
77838 |
Similarity to DNA repair protein (RAD57) | SGT4798 | ||
118616 |
Hypothetical protein | SGT1085 | ||
| BAC F4P9 | gi:2459406 | 5055 |
Putative tyrosine-specific transport protein, (TyrP) | SGT1981 |
| BAC F5O4 | gi:4038029 | 67010 |
Putative DNA-binding protein | SGT5940 |
| BAC F6E13 | gi:3212846 | 65450 |
SGT3287 | |
92865 |
Putative methylene tetrahydrofolate reductase | SGT6036 | ||
| BAC F6F22 | gi:3687221 | 86942 |
SGT1722 | |
| BACF6P23 | gi:2264367 | 82983 |
NAD+ - dependent isocitrate dehydrogenase subunit 2 (IDH2) | SGT1886 |
| BAC F7F1 | gi:3201608 | 37540 |
cDNA clone 224P21T7 | SGT4349 |
75729 |
SGT5083 | |||
| BAC F8N16 | gi:3927822 | 56370 |
Putative cytochrome P450 | SGT4993 |
| BAC F10A8 | gi:4262221 | 6243 |
SGT6723 | |
6801 |
SGT4482 | |||
8423 |
SGT1719 | |||
10225 |
RING-H2 finger protein RHA2b | SGT6304 | ||
12301 |
Putative amino acid or GABA permease | SGT4598 | ||
13629 |
Putative amino acid or GABA permease | SGT5510 | ||
14454 |
SGT4485 | |||
15849 |
SGT4756 | |||
18145 |
SGT3976 | |||
30507 |
Putative receptor protein kinase | SGT5537 | ||
31290 |
Putative receptor protein kinase | SGT1712 | ||
32530 |
SGT5363 | |||
35978 |
cDNA clone F1H8T7 | SGT4113 | ||
73480 |
cDNA clone 205D13T7 | SGT4369 | ||
77740 |
Hypothetical protein | SGT4713 | ||
82135 |
Hypothetical protein | SGT6248 | ||
84294 |
Hypothetical protein | SGT6340 | ||
85293 |
Hypothetical protein | SGT5112 | ||
85400 |
Hypothetical protein | SGT4427 | ||
| BAC F11L15 | gi:5729703 | 2266 |
Pale cress gene PAC | SGT6920 |
8840 |
Similarity to predicted Arabidopsis proteins | SGT6780 | ||
| BAC F13H10 | gi:3894179 | 69303 |
Hypothetical protein | SGT4750 |
| BAC F13J11 | gi:4726109 | 64702 |
Putative somatic embryogenesis receptor-like kinase | SGT5354 |
| BAC F13M22 | gi:3236234 | 62145 |
Putative phosphoribosylaminoimidazole carboxylase | SGT4915 |
| BAC F13P17 | gi:3337347 | 2030 |
Putative protein kinase | SGT4868 |
24022 |
Hypothetical protein | SGT4456 | ||
38984 |
SGT5094 | |||
47880 |
SGT1696 | |||
50230 |
cDNA clone 205A11T7 | SGT3722 | ||
50840 |
Hypothetical protein | SGT4173 | ||
| BAC F16B22 | gi:3341671 | 30381 |
SGT5203 | |
20300 |
Putative zinc finger protein | SGT5021 | ||
? |
Putative cellulase | SGT4832 | ||
| BAC F16M14 | gi:3335356 | 59405 |
CAX1, which encodes a high affinity calcium antiporter | SGT4104 |
| BAC F16P2 | gi:3980374 | 65744 |
SGT5171 | |
120117 |
SGT3423 | |||
| BAC F17A22 | gi:3738275 | 18935 |
Hypothetical protein | SGT1191 |
23323 |
Hypothetical protein | SGT5654 | ||
37790 |
cDNA clones 97E18T7 210L3T7 | SGT4101 | ||
93725 |
Hypothetical protein | SGT2765 | ||
| BAC F17K2 | gi:2979540 | 51782 |
SGT4970 | |
| BAC F19I3 | gi:3033373 | 2168 |
Hypothetical protein | SGT4530 |
2180 |
Hypothetical protein | SGT4533 | ||
5500 |
Putative berberine bridge enzyme | SGT3441 | ||
27486 |
SGT5238 | |||
29060 |
SGT5682 | |||
35625 |
SGT1706 | |||
57600 |
Hypothetical protein | SGT2837 | ||
| BAC F20M17 | gi:4887740 | 26723 |
SGT6426 | |
89198 |
Putative indole-3-acetate beta-glucosyltransferase | SGT5139 | ||
| BAC F23H14 | gi:5870284 | Weak similarity to yeast membrane protein PTM1 precursor | SGT5414 | |
| BAC F24H14 | gi:4217996 | 79440 |
Putative protein kinase | SGT6568 |
| BAC F26C24 | gi:3252804 | 30960 |
SGT2966 | |
| BAC F26H11 | gi:4803919 | 75900 |
SGT6602 | |
| BAC F27D4 | gi:4115370 | 53524 |
Putative limonene cyclase | SGT4004 |
| BAC F28I8 | gi:4544405 | 24560 |
Hypothetical protein | SET1022 |
| BAC T06D20 | gi:1871173 | 66890 |
SGT4690 | |
| BAC T08I13 | gi:2275194 | 3840 |
Similarity to Oryza sativa water stress-induced protein WSI76, cDNA 107N1T7 | SGT4041 |
| BAC T1D16 | gi:3075383 | 21826 |
G protein alpha subunit 1, (GPA1) | SGT5667 |
| BAC T2G17 | gi:4580454 | 51825 |
SGT5951 | |
| BAC T3A4 | gi:3831437 | 27730 |
SGT4076 | |
| BAC T3F17 | gi:3702315 | 10970 |
SGT4698 | |
| BAC T3K9 | gi:3402695 | 24900 |
Hypothetical protein | SGT4705 |
| BAC T4C15 | gi:3668073 | 6545 |
mRNA for LEA D113 type2 protein | SGT3064 |
32830 |
Hypothetical protein | SGT3118 | ||
85650 |
Hypothetical protein | SGT3502 | ||
| BAC T6P5 | gi:4006815 | 13875 |
Putative translation initiation factor eIF-2B, alpha subunit | SGT5299 |
| BAC T7F6 | gi:3928074 | 78790 |
SGT5301 | |
| BAC T8O11 | gi:4220468 | 11730 |
Hypothetical protein | SGT6348 |
15733 |
SGT5754 | |||
17350 |
Hypothetical protein | SGT6484 | ||
34657 |
Similarity to cleavage and polyadenylation specifity factor | SGT4559 | ||
38445 |
Similarity to cleavage and polyadenylation specifity factor | SGT1922 | ||
77403 |
Putative beta-1,3-glucanase | SGT85 | ||
| BAC T9D9 | gi:3150395 | 38847 |
Homologous to Arabidopsis anter-specific proline-rich protein (APG) | SET1059 |
40700 |
SGT22 | |||
57890 |
Hypothetical protein | SGT5163 | ||
| BAC T9J22 | gi:2739359 | 5450 |
Putative peroxisome assembly protein, PER8 | SGT3777 |
| BAC T9J23 | gi:4249393 | 43740 |
Weak similarity to Zea mays CRP1 | SGT6526 |
53114 |
cDNA clone 92E15T7 | SGT4163 | ||
72418 |
Hypothetical protein | SGT4071 | ||
| BAC T10F5 | gi:4558656 | 40616 |
Putative malate oxidoreductase (NAD) | SGT6246 |
40770 |
Putative malate oxidoreductase (NAD) | SGT6035 | ||
| BAC T11A7 | gi:2335089 | 42880 |
cDNA clone 89I22T7 & 120H1T7 | SGT4430 |
| BAC T13E11 | gi:4309747 | 30953 |
Putative transposase | SGT4730 |
30960 |
Putative transposase | SGT5725 | ||
30986 |
Putative transposase | SGT4985 | ||
| BAC T13L16 | gi:2708736 | 13141 |
GT3746 | |
66610 |
similar to Z. mays physical impedence protein IIG2 | SGT6531 | ||
| BAC T13P21 | gi:4263813 | 23941 |
cDNA clone 82C1T7; 166F9T7; 204I18T7. | SGT4080 |
| BAC T14G11 | gi:2342717 | 28407 |
SGT5112 | |
49860 |
Hypothetical protein | SGT3669 | ||
| BAC T14P1 | gi:4895233 | 24888 |
SGT6197 | |
| BAC T16B12 | gi:3746057 | 30036 |
Hypothetical protein | SGT4444 |
| BAC T16F16 | gi:3894156 | 1433 |
Putative protein kinase | SGT5281 |
11280 |
Hypothetical protein | SGT5248 | ||
11530 |
Hypothetical protein | SGT4801 | ||
15545 |
SGT4468 | |||
19910 |
SGT5940 | |||
34600 |
similar to phloem-specific lectin | SGT6639 | ||
35547 |
Similarity to phloem-specific lectin | SGT3257 | ||
37130 |
SGT4335 | |||
| BAC T17M13 | gi:3461810 | 15240 |
SGT7149 | |
21944 |
Hypothetical protein | SGT5362 | ||
| BAC T18E12 | gi:3548797 | 32830 |
SGT3557 | |
| BAC T20F6 | gi:2947056 | 25790 |
Putative membrane protein | SGT4796 |
| BAC T20F21 | gi:4263774 | 56639 |
cDNA clones 178H8T7 and 178H9T7; putative glucosyltransferase | SGT4425 |
| BAC T20K9 | gi:3445196 | 32782 |
GT4730 | |
54580 |
SGT1958 | |||
| BAC T24P15 | gi:2673901 | 41310 |
Hypothetical protein | SGT4698 |
| BAC T26B15 | gi:3298532 | 71915 |
Hypothetical protein | SGT4091 |
| BAC T26I20 | gi:3650026 | 15170 |
cDNA clone VBVHF04 | SGT4036 |
15174 |
cDNA clone VBVHF04 | SGT10049 | ||
73425 |
Similarity to auxin-responsive protein GH3 | SGT4174 | ||
74340 |
Similarity to auxin-responsive protein GH3 | SGT736 | ||
| BAC T26J13 | gi:3241939 | 14984 |
Hypothetical protein | SGT5133 |
| BAC T29F13 | gi:3132469 | 5918 |
FAH1 which encodes fatty acid hydroxylase | SGT4272 |
13215 |
Putative protein phosphatase 2C | SGT4978 | ||
28627 |
ATHB-14, which encodes homeobox protein | GT4606 | ||
34490 |
SGT4074 | |||
37250 |
Similarity to proline-rich protein | SGT4295 | ||
37905 |
Similarity to proline-rich protein | SGT4231 | ||
37910 |
Similarity to proline-rich protein | SGT4458 | ||
38377 |
Hypothetical protein | SGT3183 | ||
38710 |
Hypothetical protein | SGT4500 | ||
38715 |
Hypothetical protein | SGT4450 | ||
42431 |
SGT2215 | |||
47830 |
Hypothetical protein | SGT4123 | ||
51434 |
Hypothetical protein | SGT4185 | ||
51453 |
Hypothetical protein | SGT4529 | ||
| BAC T29E15 | gi:3738313 | 38693 |
Putative polygalacturonase | SGT2768 |
| BAC T30D6 | gi:4309719 | 70880 |
SGT5787 | |
| BAC T30B22 | gi:2529657 | 71770 |
Putative MYB-related transcription factor (protein P) | SGT6254 |
| BAC T31E10 | gi:3327922 | 639 |
Multidrug resistance protein 2 (AtMRP2) | SGT3742 |
32650 |
cDNA clone 213K12T7; putative pyruvate dehydrogenase complex E1 beta subunit | SGT4246 | ||
66576 |
Putative cytochrome p450 protein | SGT5943 | ||
| BAC T32F12 | gi:3608126 | 68929 |
SGT3709 | |
| P1 MFL8 | gi:4531433 | 25020 |
cDNA clone VBVXG05; similarity to pectinesterase | SGT5109 |
42941 |
SGT5306 |
| Chromosome 3 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| ATEM1 locus (AF049236) | gi:3068702 | 52228 |
Hypothetical protein | SGT3594 |
| BAC F24K9 | gi:6006873 | 14718 |
SGT6629 | |
14239 |
Similarity to unknown Arabidopsis proteins | SGT6466 | ||
| BAC MZB10 | gi:5923662 | 42820 |
SGT6535 | |
| BAC T12H1 | AC009177 | cDNA 96K12T7; similarity to microsomal signal peptidase | SGT6261 | |
| P1 MDC16 | gi:3869068 | 31381 |
SGT483 | |
| P1 MFE16 | gi:5041964 | 50680 |
Putative phosphate permease | SGT4179 |
| P1 MJK13 | gi:4159707 | 1900 |
SGT5726 | |
| P1 MLM24 | gi:3241922 | 83170 |
SGT10080 | |
| P1 MLN21 | gi:4159709 | 36170 |
SGT6236 | |
46760 |
cDNA clone E8H8T7; Similarity to Zea mays leucine-rich repeat transmembrane protein kinase 1 | SGT4523 | ||
| P1 MOA2 | gi:5041970 | 50630 |
putative reverse transcriptase | SGT6544 |
| P1 MRC8 | gi:3985952 | 20800 |
Putative beta-glucosidase | SGT5104 |
58581 |
Hypothetical protein | SGT1532 | ||
| P1 MTC11 | gi:4519197 | 21350 |
cDNA clone 2G8XP, cytochrome P450 monooxygenase | SGT6641 |
| P1 MVI11 | gi:5832740 | 5818 |
Similarity to putative Arabidopsis receptor protein kinases | SGT5399 |
| P1 MXL8 | gi:4220644 | 648 |
SGT6533 | |
20740 |
Similarity to unknown Arabidopsis proteins | SGT6441 | ||
| TAC K14A17 | gi:4757392 | 64010 |
cDNA 95L21XP | SGT5680 |
| TAC K15N2 | gi:5541653 | 45430 |
cDNA 32C10TT | SGT6577 |
60720 |
SGT6914 |
| Chromosome 4 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| AP2 contig fr. No. 1 (Z99707) | gi:4376087 | 12570 |
cDNA clone E3E8T7 | SGT1954 |
37476 |
similarity to Arabidopsis protein kinase TMK1 | SGT6804 | ||
| AP2 contig fr. No. 2 (Z99708) | gi:4006885 | 25420 |
Geranylgeranyl pyrophosphate synthase mRNA | SGT5046 |
26907 |
cDNA clone 31B1T7; ubiquitin-protein ligase-like protein | SGT6415 | ||
178690 |
ROTUNDIFOLIA3 (ROT3) | SGT6410 | ||
188112 |
SGT6399 | |||
| ESSA I FCA contig fr. No.1 (Z97336) | gi:2244788 | 99150 |
Hypothetical protein | SGT3911 |
| ESSA I FCA contig fr. No.2 (Z97337) | gi:5302774 | 39822 |
SET572 | |
65000 |
Similarity to probable RNA helicase SUV3 | SGT3904 | ||
| ESSA I FCA contig fr. No.3 (Z97338) | gi:5280990 | 117140 |
cDNA 98D6T7; strong similarity to cytochrome P450 | SGT4233 |
| ESSA I FCA contig fr. No.5 (Z97340) | gi:5302781 | 79690 |
mRNA for receiver-like protein 5 | SGT4387 |
| ESSA I FCA contig fr. No.6 (Z97341) | gi:5302794 | 16530 |
SGT6783 | |
| ESSA I FCA contig fr. No.7 (Z97342) | gi:2245031 | 150797 |
Allergen homolog | SGT5770 |
| ESSA I FCA contig fr. No.8 (Z97343) | gi:2245073 | 122040 |
SGT3743 | |
| BAC IG002N01 | gi:2191126 | 41275 |
Hypothetical protein | SGT2247 |
53300 |
Hypothetical protein | SGT6752 | ||
80250 |
cDNAs T46771; N97218; T41776; T42436; H37214 | SGT4784 | ||
| BAC F4C21 | gi:3299824 | 18492 |
Putative C-type U1 snRNP | SGT5671 |
25507 |
Putative alcohol dehydrogenase | SGT4293 | ||
| BAC F5I10 | gi:2252823 | 4870 |
Hthetical protein | SET701 |
22100 |
SGT5102 | |||
24770 |
Transmembrane protein | SGT3508 | ||
25581 |
Transmembrane protein | SGT1653 | ||
26250 |
Transmembrane protein | SGT4599 | ||
33565 |
SET635 | |||
62525 |
Receptor-like protein kinase | SGT4413 | ||
63180 |
Receptor-like protein kinase | SGT4409 | ||
63385 |
Receptor-like protein kinase | SGT2763 | ||
63612 |
Receptor-like protein kinase | SGT4745 | ||
63696 |
SGT6370 | |||
66370 |
SGT6655 | |||
68063 |
Weak similarity to receptor protein kinase, | SGT2381 | ||
68630 |
Weak similarity to receptor protein kinase; | SGT1739 | ||
77184 |
cDNA clone TAY066 | SGT5156 | ||
77200 |
cDNA clone TAY066 | SGT5837 | ||
78685 |
cDNA clone TAY066 | SGT1890 | ||
83410 |
Hypothetical protein | SGT1047 | ||
97040 |
Hypothetical protein | SGT5448 | ||
97200 |
Hypothetical protein | SGT1516 | ||
| BAC F6G17 | gi:4468801 | 24546 |
Smilarity to unknown Arabidopsis proteins | SET1036 |
32035 |
Similarity to soybean auxin-responsive gene (GH3) product | SGT5949 | ||
69135 |
Similarity to beta-ketoadipate enol-lactone hydrolase, Acinetobacter sp, - contains ESTs gb: T45314, AA586098 | SGT6839 | ||
| BAC F6I18 | gi:2980757 | 20750 |
Similarity to probable yeast membrane protein YBL004w | SGT2102 |
| BAC F6N15 | gi:3193311 | 6500 |
SGT469 | |
6980 |
SGT5243 | |||
7439 |
cDNA clone G11F3T7 | SGT4353 | ||
7577 |
cDNA clone G11F3T7 | SGT1048 | ||
8038 |
Unknown protein coded by cDNA clone W43412 | SGT4405 | ||
15465 |
Hypothetical protein | SGT6152 | ||
17560 |
Hypothetical protein | SGT4224 | ||
20250 |
Hypothetical protein | SGT5545 | ||
23310 |
SGT4263 | |||
22708 |
SGT66 | |||
27645 |
transfer RNA-Lys gene | SET673 | ||
31005 |
40S ribosomal protein S13 | SGT6422 | ||
48235 |
SGT270 | |||
48860 |
SGT4133 | |||
50920 |
SGT5040 | |||
51430 |
Similarity to Scarecrow, cDNA VBVVB08 | SGT3425 | ||
53065 |
Similarity to Scarecrow, | SGT534 | ||
55414 |
SGT5193 | |||
63903 |
Similarity to Medicago sativa cold-regulated gene (corC) | SGT5885 | ||
64205 |
Similarity to Medicago sativa cold-regulated gene (corC), cDNA R65504 | SGT4302 | ||
66415 |
SET1023 | |||
72687 |
SGT3404 | |||
76950 |
Similarity to Arabidopsis AT-hook protein 1 | SGT6582 | ||
79245 |
SGT4110 | |||
89250 |
Similarity to the subtilase family of serine proteases | SGT507 | ||
91393 |
cDNA N96291 | SGT4172 | ||
91527 |
cDNA N96291 | SGT2152 | ||
| BAC F6N23 | gi:3047100 | 530 |
Hypothetical protein | SGT4094 |
2020 |
SGT1862 | |||
4235 |
SGT10037 | |||
8365 |
SGT5411 | |||
15210 |
SGT5654 | |||
36450 |
Hypothetical protein | SET655 | ||
55460 |
SGT5147 | |||
77090 |
Strong similarity to phosphoribosylanthranilate transferase | SGT4305 | ||
85017 |
SGT5772 | |||
90653 |
Anthocyaninless2 (ANL2) | SGT7057 | ||
| BAC F7J7 | gi:4584387 | 66326 |
cDNA clone 36B3T7 | SGT5667 |
70773 |
Similarity to Escherichia coli UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | SGT4982 | ||
| BAC F8B4 | gi:4049332 | 60308 |
SGT5144 | |
| BAC F8M12 | gi:3513725 | 27760 |
SGT4109 | |
| BAC F10M6 | gi:2864607 | 64125 |
Similarity to Phaseolus vulgaris HEAT SHOCK 70 KD protein; contains EST gb: 394917 | SGT1005 |
73482 |
Similarity to unknown Arabidopsis proteins | SGT4009 | ||
| BAC F11O4 | gi:3695372 | 11178 |
SGT2731 | |
31360 |
Similarity to reverse transcriptase-like proteins | SGT4686 | ||
69560 |
SGT5229 | |||
| BAC F16A16 | gi:4218109 | 37760 |
Similarity to phytochrome-associated protein 3 | SGT6680 |
| BAC F16G20 | gi:3451055 | 68100 |
Similarity to unknown Arabidopsis proteins | SGT840 |
| BAC F17I5 | gi:3297806 | 62042 |
EST clones gb: AA712573, H36510 | SGT4968 |
| BAC F17L22 | gi:4455262 | 91094 |
Meristem L1-specific homeobox protein (ATML1) | SGT4886 |
| BAC F19F18 | gi:4468976 | 65560 |
SGT1570 | |
| BAC F21C20 | gi:5262205 | 22412 |
SGT6576 | |
65597 |
Similarity to Eschscholzia californica reticuline oxidase | SGT5837 | ||
| BAC F21P8 | gi:3021263 | 68070 |
Similarity to Brassica oleracea serine/threonine kinase | SGT6322 |
| BAC F22I13 | gi:4539331 | 47630 |
Putative pollen allergen | GT2577 |
| BAC F23E13 | gi:2961370 | 20112 |
Hypothetical protein | SGT5083 |
50500 |
Putative glycine-rich cell wall protein | SGT4381 | ||
| BAC F13M23 | gi:4455229 | 62490 |
SGT5239 | |
| BAC F26P21 | gi:3688169 | 64620 |
Pyruvate decarboxylase-1 (PDC1) | SGT4861 |
73630 |
SGT5476 | |||
| BAC F28A23 | gi:3763944 | 60570 |
Hypothetical protein | SGT4142 |
| BAC F28J12 | gi:2832639 | 84930 |
Lipase-like protein | SGT3532 |
| BAC F28M20 | gi:3281847 | 29136 |
SGT1446 | |
| BAC M3E9 | gi:5708090 | 15710 |
SGT5380 | |
| BAC M4I22 | gi:3269280 | 25860 |
SGT3855 | |
| BAC T4I9 | gi:3242970 | 12435 |
Predicted protein | SGT6479 |
| BAC T4L20 | gi:3096911 | 101680 |
SGT2639 | |
| BAC T5C23 | gi:4539448 | 61690 |
H+-transporting ATPase-like protein | SGT5190 |
| BAC T5J8 | gi:2815519 | 32032 |
SGT1244 | |
| BAC T6L9 | gi:4732170 | SGT5071 | ||
| BAC T8O5 | gi:2894557 | 73995 |
Peroxidase ATP1a | SGT751 |
| BAC T9A14 | gi:4490324 | 50353 |
PRP8 which encodes putative splicing factor | SGT5125 |
| BAC T10I14 | gi:2832667 | 18331 |
Hypothetical protein | SGT5311 |
26410 |
SGT2414 | |||
55501 |
SGT5315 | |||
| BAC T10M13 | gi:2104523 | 67400 |
CTP synthase, UTP ammonia ligase | SGT5822 |
| BAC T13J8 | gi:4455348 | 30735 |
SGT6459 | |
| BAC T14P8 | gi:3193282 | 88040 |
Similar to bacterial and fungi pectinesterases | SET1013 |
| BAC T15B16 | gi:3859590 | 21650 |
Similarity to unknown Arabidopsis proteins | SGT4158 |
25860 |
Similarity to wild oat DNA-binding protein ABF2 | SET1103 | ||
48262 |
SGT6092 | |||
62880 |
100 bp upstream mRNA for an ABC1-like gene | SGT5464 | ||
76613 |
cDNA 159P8T7; Similarity to cysteine proteases | SGT5544 | ||
85180 |
Hypothetical protein | SGT6134 | ||
| BAC T15N24 | gi:4938493 | 80360 |
Similarity to probable Arabidipsis kinesin | SGT6731 |
| BAC T19F6 | gi:2262097 | 2400 |
Similarity to Thaumatococcus daniellii THAUMATIN I | SGT5141 |
| BAC T19P19 | gi:5748500 | 3853 |
mRNA for gamma-glutamyl transpeptidase | SGT6375 |
38907 |
Similarity to Rhodobacter sphaeroides photosynthesis response regulatory protein (PRR) | SGT2157 | ||
| BAC T22A6 | gi:5051759 | 15813 |
SGT6657 | |
| BAC T24H24 | gi:3293581 | 60158 |
Similar to pyrophosphate-fructose 6-phosphate 1-phosphotransferase | SGT458 |
| BAC T25K17 | gi:4539415 | 14555 |
SGT6362 | |
64819 |
Similarity to subtilisin protease | SGT6731 | ||
| BAC T29A15 | gi:4469002 | 71040 |
Similarity to yeast intramitochondrial sorting protein (MSP1) | SGT6374 |
| BAC TM018A10 | gi:2252848 | 6754 |
Similarity to receptor kinase | SGT6377 |
7569 |
Similarity to receptor kinase | SGT4883 | ||
9770 |
SGT4248 | |||
15150 |
SGT3556 | |||
16674 |
SGT3171 | |||
19578 |
SGT5787 | |||
50270 |
SGT5230 | |||
60650 |
Similarity to soybean auxin-induced protein (X15), cDNA T43845 | SGT2079 | ||
65480 |
Similarity to the MYC family of transcription factors | SGT4072 | ||
78486 |
Hypothetical protein | SGT6098 | ||
| P1 M7J2 | gi:5596409 | 4948 |
Contains EST gb:T45048 | SGT5154 |
| YAC CIC5B11 | gi:3150006 | 28997 |
SGT1621 | |
29615 |
SGT5300 | |||
29517 |
SGT5467 |
| Chromosome 5 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| BAC F6H11 | gi:2827698 | 11330 |
Hypothetical protein | SGT6688 |
| BAC T1N24 | gi:4809270 | 18356 |
SGT5071 | |
| BAC T12B11 | gi:4589446 | 4970 |
Hypothetical protein | SGT5109 |
| BAC T20O7 | gi:4757416 | 4216 |
SGT7049 | |
| P1 MBB18 | gi:2264303 | 32863 |
SGT5183 | |
| P1 MCA23 | gi:3449327 | 22448 |
160bp upstream of farnesyl diphosphate synthase FPS1 gene | SGT5421 |
| P1 MCK7 | gi:3869067 | 55494 |
SGT5705 | |
| P1 MDC12 | gi:2618600 | 13672 |
Hypothetical protein | SGT96 |
| P1 MDN11 | gi:3510340 | 18340 |
SGT1924 | |
| P1 MED24 | gi:2264307 | 42067 |
SGT617 | |
| P1 MFB13 | gi:2760169 | 16111 |
SGT1587 | |
| P1 MGI19 | gi:2564046 | 8526 |
Similarity to Solanum tuberosum alpha-glucosidase | SGT5691 |
9639 |
Similarity to Solanum tuberosum alpha-glucosidase | SGT754 | ||
| P1 MHF15 | gi:2351065 | 16120 |
SGT5901 | |
16132 |
SGT5501 | |||
38489 |
Similarity to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase | SGT5015 | ||
| P1 MHK7 | gi:2924654 | 53859 |
Similarity to Dictyostelium myosin heavy chain kinase B | SGT3490 |
| P1 MJB21 | gi:2564047 | 48470 |
SGT5101 | |
48940 |
SGT4564 | |||
64790 |
SGT4641 | |||
| P1 MJB24 | gi:3869072 | 35061 |
SGT1647 | |
| P1 MJC20 | gi:3510343 | 81178 |
SGT2029 | |
| P1 MMI9 | gi:3869074 | 39607 |
cDNA clone 178E21XP | SGT10154 |
| P1 MMN10 | gi:3241923 | 5460 |
SGT959 | |
65500 |
Similarity to unknown Arabidopsis proteins | SGT7061 | ||
| P1 MNA5 | gi:2924729 | 29877 |
SGT4802 | |
| P1 MNB8 | gi:3702734 | 37600 |
SGT5882 | |
| P1 MNC6 | gi:3241924 | 3390 |
SGT5496 | |
| P1 MNC17 | gi:3449331 | 29667 |
Similarity to unknown Arabidopsis proteins | SGT3726 |
| P1 MOJ9 | gi:2828182 | 5514 |
SGT10163 | |
| P1 MOK16 | gi:2264312 | 8093 |
SGT1875 | |
8340 |
cDNA clone 248K21T7 | SGT6329 | ||
| P1 MOP10 | gi:2264313 | 51719 |
Similarity to ethylene-forming enzyme and flavonol synthase | SGT473 |
| P1 MQJ16 | gi:3046852 | 36181 |
Hypothetical protein | SGT4401 |
| P1 MRA19 | gi:3046853 | 82480 |
Similarity to brassinosteroid insensitive 1, cDNA 123I16T7 | SGT5600 |
83130 |
SGT6805 | |||
| P1 MRH10 | gi:2351068 | 50955 |
SGT4835 | |
| P1 MRI1 | gi:3702736 | 3593 |
cDNA F3A10T7; 251K2T7; Similar to Arabidopsis CONSTANS | SGT4250 |
| P1 MTH12 | gi:2351070 | 34036 |
SGT5621 | |
| P1 MTH16 | gi:3985955 | 31921 |
Similarity to unknown Arabidopsis protein | SGT5273 |
| P1 MTI20 | gi:3128143 | 52800 |
Similarity to unknown Arabidopsis protein | SGT7011 |
| P1 MUA2 | gi:2924732 | 67430 |
3'-end of putative transcription factor, (MYB36) mRNA | SGT4370 |
| P1 MUF9 | gi:2924733 | 12438 |
cDNA clone 275D8T7 | SGT40 |
| P1 MUG13 | gi:2264317 | 52462 |
Similarity to putative pectinesterases | SGT1758 |
| P1 MUK11 | gi:2618605 | 76422 |
SGT4948 | |
| P1 MUP24 | gi:2264318 | 7761 |
Similarity to unknown Arabidopsis proteins | SGT3590 |
27135 |
SGT15 | |||
| P1 MVP7 | gi:4589443 | 36420 |
SGT6268 | |
| P1 MXC9 | gi:2696018 | 69502 |
SGT4822 | |
| P1 MXC20 | gi:2656031 | 11289 |
SGT4278 | |
| P1 MXE10 | gi:2924734 | 2052 |
SGT10058 | |
| P1 MXF12 | gi:3449333 | 774 |
Similar to Daucus carota somatic embryogenesis receptor-like kinase | SGT4090 |
| P1 MYH19 | gi:2760173 | 51001 |
Similarity to unknown Arabidopsis proteins | SGT1899 |
| P1 MZA15 | gi:3449323 | 13480 |
SGT7154 | |
| TAC K2A18 | gi:2924651 | 39612 |
Similarity to C3HC4-type zinc finger proteins | SGT1606 |
59860 |
Putative alpha-mannosidase | SGT5479 | ||
61679 |
Similarity to RING zinc finger protein? | SGT1547 | ||
| TAC K2I5 | gi:4589419 | 45258 |
SGT6725 | |
| TAC K7J8 | gi:4220633 | 6070 |
cDNA 40D11T7, homology to Aspergillus niger xylosidase | SGT5561 |
| TAC K9L2 | gi:2924652 | 21805 |
SGT4750 | |
| TAC K14B20 | gi:3702723 | 36505 |
SGT4143 | |
| TAC K15N18 | gi:3241916 | 5636 |
cDNA clones 64C8T7 and 181I8T7 | SGT4048 |
| TAC K17N15 | gi:3702724 | 42370 |
SGT4617 | |
| TAC K18G13 | gi:3128134 | 25432 |
NADPH-protochlorophyllide oxidoreductase | SGT4757 |
| TAC K18J17 | gi:3510336 | 37932 |
SGT1436 | |
| TAC K21H1 | gi:3985931 | 9966 |
cDNA clones FAFC74-1; E2G4T7 | SGT4223 |
| TAC K21L13 | gi:4757395 | 6338 |
SGT5145 | |
| TAC K23F3 | gi:5541655 | 28000 |
SGT5269 | |
| Y08951 | gi:1632775 | 2466 |
t5r gene pyrroline carboxylate reductase | SGT5089 |
| Unknown Chromosome | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| BAC T19D16 | gi:1931636 | 63787 |
SGT4669 | |
| clone F26K10 | gi:4775266 | SGT5215 | ||
| clone T16I18 | gi:4884022 | 4860 |
SGT5388 | |
| BAC End F8L1 | gi:5285502 | +70 |
Pyruvate dehydrogenase kinase (PDK) AF039406 | SGT6269 |
| BAC end F14N10 | gi:5288855 | +200 |
SGT6229 | |
| BAC End F18N10 | gi:2998872 | 144 |
Putative retrotransposon polyprotein | SGT6242 |
| BAC End F19O21 | gi:2091505 | 300 |
cDNA clone 200L21T7 | SGT4438 |
| BAC End F20F7 | gi:2508265 | 204 |
cDNA clone G5B6T7 | SGT6273 |
| BAC End F22L4 | gi:2092071 | 297 |
SGT4193 | |
| BAC End F24P4 | gi:2508677 | 315 |
SGT576 | |
| BAC End F25D1 | gi:3704475 | -100 |
Similarity to receptor protein kinases | SGT4624 |
59 |
Similarity to receptor protein kinases | SGT2692 | ||
| BAC End F28K9 | gi:2509130 | cDNA clone F1C8T7 | SGT570 | |
| BAC End T3D21 | gi:5290242 | 286 |
Similar to unknown Arabidopsis proteins | SGT5443 |
| BAC End T6L6 | gi:2512018 | Similarity to Schizosaccharomyces pombe 26S Proteasome regulatory subunit MTS4 | SGT4227 | |
| BAC End T10C13 | gi:2515482 | -500 |
SGT5168 | |
| BAC end T12C16 | gi:5295038 | 363 |
SGT6499 | |
| BAC End T18H19 | gi:2514711 | SGT1742 | ||
| BAC End T20N16 | gi:2628977 | SGT4487 | ||
| SET1003 | ||||
| SGT5114 | ||||
| BAC End T21N16 | gi:2629222 | 224 |
Similar to gibberellin response regulatory proteins GRS, GAI | SGT625 |
| BAC End T21O6 | gi:2091124 | 382 |
SGT5402 | |
| BAC End T22C4 | gi:2665948 | 150 |
SGT6668 | |
| BAC End T26H7 | gi:2773437 | 10 |
Weak similarity to UDP-glucose glucosyltransferase | SGT6549 |
| BAC End T27E7 | gi:2513030 | Putative reverse transcriptase | SGT5275 | |
| Z84202 | gi:1785619 | 1099 |
SGT927 | |
| gi:1495250 | 1218 |
mRNA for heat-shock protein Z70314 | SGT6215 | |
| gi:2748667 | 184 |
cDNA clone G8H2T7 N96363; NADPH-protochlorophyllide oxidoreductase | SGT29 | |
| gi:2047699 | 117 |
cDNA clone 129H2XP AA394488 | SGT35 | |
| gi:2748695 | 180 |
cDNA clone G9H4T7 N95864 | SGT49 | |
| gi:1565787 | -100 |
cDNA clone 91F18T7 AA067454 | SGT264 | |
| gi:1268171 | -20 |
cDNA clone F1C8T7 N96404 | SGT570 | |
| gi:936229 | 200 |
cDNA clone 155I4T7 T88391 | SGT820 | |
| gi:931163 | cDNA clone 51E11T7 T14219 | SGT1059 | ||
| gi:2722894 | 159 |
cDNA clone 222F13T7 AA712977 | SGT1191 | |
| gi:2747472 | 210 |
cDNA clone 11A10TT AA728515 | SGT1266 | |
| gi:914434 | cDNA clone 92N14T7 T21489 | SGT1328 | ||
| gi:1269065 | 189 |
cDNA clone G8A12T7 N96292 | SGT1428 | |
| gi:1053360 | 201 |
cDNA clones 195E17T7 H76109, 195F10T7, 195G12T7, 123N17T7 | SGT1641 | |
| gi:1216041 | cDNA clone TAP0245 F20067; similarity to ribosomal protein S8 | SGT1665 | ||
| gi:1033247 | cDNA clone GBGF589 F15267 | SGT1745 | ||
| gi:906772 | 259 |
cDNA clones 179G19T7 H37273, 91J3T7, 109F15T7 | SGT1851 | |
| gi:1932866 | -50 |
cDNA clone OS076 U74134; Similarity to putative Arabidopsis Cys3His zinc finger protein gi:1871192 | SGT2374 | |
| gi:1216885 | cDNA clone 224E17T7 N65259 | SGT2510 | ||
| gi:2749658 | 400 |
cDNA clone 184E18XP AA651416 | SGT2656 | |
| gi:2763259 | 363 |
cDNA clone 135G19T7 T46577; Similarity to cysteine proteinases | SGT4015 | |
| gi:2758676 | 158 80 |
cDNA clone 118N10T7 T43877; Similarity to UDP-glucose glucosyltransferase | SGT4057
SGT6227 |
|
| gi:557618 | 60 |
cDNA clone VBVMC05 Z38049; Smilarity to aminoacylase-1 | SGT4121 | |
| gi:2764299 | 350 |
cDNA clone 169G18T7 R65313; Similarity to thioredoxin | SGT4282 | |
| gi:2048862 | 256 |
cDNA clone 95L21XP AA395637 | SGT4331 | |
| gi:3450594 | cDNA clone 97O14XP AI100633 | SGT4355 | ||
| gi:2763934 | 264 |
cDNA clone 161E1T7 R29793; Similarity to SCARECROW | SGT4567 | |
| gi:2763288 | cDNA clone 137H16T7 T46609; Similarity to Glycine max auxin down-regulated ADR11-2 | SGT4743 | ||
| gi:2413158 | 65 |
cDNA clone 222A10T7 AA597735 | SGT4785 | |
| gi:1158355 | 294 |
cDNA clone 207N9T7 N37230; Similarity to Chlorophyll a/b-binding protein CP29 | SGT4826 | |
| gi:1268902 | 200 |
cDNA clone G4D1T7 N96767; Similarity to GRS, GAI, SCARECROW | SGT5010 | |
| gi:2048555 | 17 |
cDNA clone 122F8XP AA395344; Similarity to dynein light chain 1 | SGT10032 | |
| gi:992703 | 660 |
UBC7 encoding ubiquitin conjugating enzyme E2 U33757 | SGT45 | |
| gi:992920 | 773 |
mRNA for LEA protein in group 5 D64139 | SGT5178 | |
| gi:3449553 | 330 |
cDNA clone 125G4XP AI099814 | SGT5416 | |
| gi:974740 | cDNA clone GBGF106 F15119 | SGT6569 | ||
| gi:1216636 | -30 |
cDNA clone 224K3T7 N65010; similar to unknown protein | SGT6590 | |
| gi:1269573 | cDNA clone 246F17T7 N97206; Similarity to polygalacturonases | SGT6366 | ||
| gi:899160 | 379 |
cDNA clone TAP0050 F14351 | SGT6331 | |
| gi:3098611 | 54 |
Senescence associated gene (SAG20) mRNA AF053064 | SGT3607 | |
aThe table was updated on August 16, 1999. IMPORTANT NOTICE: All accession numbers have been substituted by GI numbers as of December 30, 1999. This action was necessiated by recent changes in the nucleotide numbering for chromosome 2 sequences displayed using the GenBank accession numbers in the older version of the table. According to GenBank, the sequence and even the name of the entry within any accession number can be changed at any time making it difficult to identify the required sequence file. Apparently GI entries are more stable than sequences labelled with accession numbers. Therefore, this modification is intended to protect the positional data in the table from being affected by future editing of the sequences specified by accession numbers.
bInsertions into previously sequenced regions (including partially sequenced) are shown.
cOriginal sequences can be extracted from GenBank by using the indicated hyperlink and/or GI number.
dNumbers indicate the insertion site according to the corresponding base number in the original GenBank sequence.
eIndicates the gene/cDNA (including predicted genes) that has been disrupted by insertion of a Ds element possibly affecting its translation (i.e., insertions occurring between 200 bases upstream of the ATG codon and the poly(A)+ site) or that shows the greatest similarity to a known protein sequence.
fEach number represents a single Ds insertion line.
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