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Database of Sequences Flanking Ds Insertionsa
| Chromosome 1 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| APETALA1 (AP1) | gi:16161 | 467 |
AP1 | GT3676 |
| near ACS1 locus (Y12776) | gi:2505873 | 17770 |
SGT4034 | |
| NIA1 | gi:22756 | 841 |
NIA1, which encodes nitrate reductase | SGT3811 |
3353 |
NIA1, which encodes nitrate reductase | SGT3878 | ||
| BAC F3F20 | gi:4580365 | 40840 |
SGT4711 | |
| BAC F3I6 | gi:2749918 | 62310 |
SGT669 | |
| BAC F3O9 | gi:4887257 | 24460 |
Similarity to DEAD/DEAH box RNA helicase family | SGT6697 |
| BAC F8K4 | gi:3282170 | 97115 |
Strong similarity to coatamer alpha subunit (HEPCOP) | SGT2025 |
| BAC F9K20 | gi:3766106 | 62970 |
SGT6879 | |
63937 |
Similarity to Arabidopsis HSF30 homolog | SGT4188 | ||
| BAC F10A5 | gi:4662609 | 4105 |
Similarity to TUBULIN BETA-1 | SGT5051 |
8527 |
SGT5129 | |||
56798 |
SGT4222 | |||
| BAC F10B6 | gi:4757662 | 49830 |
SGT5340 | |
| BAC F11M15 | gi:4165340 | 30748 |
Similarity to Arabidopsis AINTEGUMENTA protein | SGT4287 |
97670 |
SGT4435 | |||
| BAC F11P17 | gi:2182289 | 2581 |
Putative amino acid permease | SGT4754 |
| BAC F12F1 | gi:2584827 | 1522 |
SGT4157 | |
55230 |
SGT3444 | |||
| BAC F15K9 | gi:3789706 | 10170 |
SGT3130 | |
| BAC F17L21 | gi:3228389 | 84063 |
Hypothetical protein | SGT10031 |
| BAC F19G10 | gi:2098816 | 22410 |
Similarity to Bacillus subtilis SPORE COAT PROTEIN A | SGT4261 |
40410 |
SGT3196 | |||
| BAC F19P19 | gi:2341023 | 96690 |
IAA17/AXR3 auxin response gene | GT3958 |
| BAC F20D21 | gi:4587641 | 42150 |
Hypothetical protein | SGT1001 |
| BAC F20N2 | gi:3492855 | 102450 |
SGT5517 | |
| BAC F20P5 | gi:2182286 | 43080 |
SGT5519 | |
| BAC F20D23 | gi:5103850 | 11930 |
Hypothetical protein | SGT5565 |
| BAC F21B7 | gi:2618677 | 29385 |
Similarity to protochlorophyllide reductase precusor | SGT5118 |
| BAC F22K20 | gi:2477521 | 14742 |
Highly similar to at EXT1, which encodes extensin | SGT3598 |
83840 |
Homology to peroxidases | SGT3811 | ||
86998 |
SGT4925 | |||
| BAC F22O13 | gi:3063438 | 123141 |
SGT5150 | |
| BAC F23M19 | gi:5091613 | 108 |
SGT6846 | |
80400 |
cDNA clone VBVIH04 | SGT7178 | ||
| BAC F24J5 | gi:5724802 | -160 |
SGT6414 | |
| BAC T1F15 | gi:3108024 | 20897 |
Similarity to mannosyl-oligosaccharide glucosidase | SET1077 |
| BAC T2K10 | gi:4204173 | 20954 |
SGT5323 | |
| BAC T4O12 | gi:5019261 | 34774 |
cDNA clone 48A2T7 | SGT6578 |
93230 |
SGT6546 | |||
| BAC T7A14 | gi:4027862 | ~1050 |
SGT1882 | |
45130 |
EST clones gb: H36249, AA59732 and AA651219 | SGT4805 | ||
| BAC T8F5 | gi:3335331 | 33970 |
SGT6201 | |
| BAC T8K14 | gi:4713943 | 37376 |
Hypothetical protein | SGT6628 |
| BAC T14N5 | gi:3176694 | 10500 |
Similarity to Oryza sativa water stress-induced protein WSI76; EST clone gb: T13944 | SGT5752 |
| BAC T17H3 | gi:5578726 | 12104 |
Hypothetical protein | SGT2908 |
13362 |
Similarity to unknown Arabidopsis proteins | SGT4632 | ||
| BAC T26J12 | gi:2645198 | 21970 |
Putative pectinesterase | SGT6342 |
| BAC T27G7 | gi:6143825 | 61674 |
SGT5038 | |
| YAC yUP8H12 | gi:2358139 | 48990 and 53740 |
Strong
similarity to Arabidopsis peroxidase ATP11a (2 Ds copies) |
SGT4342 |
| YAC YUP8H12R | gi:2494106 | 45510 |
SGT5246 | |
| cosmid g17311 (U53502) | gi:1296310 | 8829 |
SGT1015 | |
| cosmid g8261 (U53501) | gi:1297184 | 4020 |
Chromomethylase CMT1 | SGT6608 |
| Chromosome 2 | ||||
| Map Location b | GenBank
GI Number c |
Position d | Disrupted Gene / Predicted Gene e | Line Number f |
| BAC F1O11 | gi:4581138 | 27556 |
SGT5698 | |
| BAC F2I9 | gi:3785968 | 9210 |
Homologous to auxin transport proteins AtPIN1 and AtPIN2 | SGT4961 |
9377 |
Homologous to auxin transport proteins AtPIN1 and AtPIN2 | SGT1708 | ||
62687 |
cDNA clone 118P19T7 putative major latex protein | SGT4665 | ||
65598 |
SGT5683 | |||
72481 |
SGT1873 | |||
75952 |
SGT5591 | |||
82384 |
RGA1 which encodes gibberellin response GRS protein | SGT842 | ||
88220 |
SGT6341 | |||
89569 |
SGT4602 | |||
| BAC F3G5 | gi:4056476 | 37215 |
Hypothetical protein | SGT6369 |
| BAC F3N11 | gi:4003353 | 16500 |
SGT5129 | |
| BAC F4I18 | gi:3386593 | 78170 |
SGT5304 | |
| BAC F4L23 | gi:2583106 | 4635 |
Putative surface protein | SGT6202 |
77838 |
Similarity to DNA repair protein (RAD57) | SGT4798 | ||
118616 |
Hypothetical protein | SGT1085 | ||
| BAC F4P9 | gi:2459406 | 5055 |
Putative tyrosine-specific transport protein, (TyrP) | SGT1981 |
| BAC F5O4 | gi:4038029 | 67010 |
Putative DNA-binding protein | SGT5940 |
| BAC F6E13 | gi:3212846 | 65450 |
SGT3287 | |
92865 |
Putative methylene tetrahydrofolate reductase | SGT6036 | ||
| BAC F6F22 | gi:3687221 | 86942 |
SGT1722 | |
| BACF6P23 | gi:2264367 | 82983 |
NAD+ - dependent isocitrate dehydrogenase subunit 2 (IDH2) | SGT1886 |
| BAC F7F1 | gi:3201608 | 37540 |
cDNA clone 224P21T7 | SGT4349 |
75729 |
SGT5083 | |||
| BAC F8N16 | gi:3927822 | 56370 |
Putative cytochrome P450 | SGT4993 |
| BAC F10A8 | gi:4262221 | 6243 |
SGT6723 | |
6801 |
SGT4482 | |||
8423 |
SGT1719 | |||
10225 |
RING-H2 finger protein RHA2b | SGT6304 | ||
12301 |
Putative amino acid or GABA permease | SGT4598 | ||
13629 |
Putative amino acid or GABA permease | SGT5510 | ||
14454 |
SGT4485 | |||
15849 |
SGT4756 | |||
18145 |
SGT3976 | |||
30507 |
Putative receptor protein kinase | SGT5537 | ||
31290 |
Putative receptor protein kinase | SGT1712 | ||
32530 |
SGT5363 | |||
35978 |
cDNA clone F1H8T7 | SGT4113 | ||
73480 |
cDNA clone 205D13T7 | SGT4369 | ||
77740 |
Hypothetical protein | SGT4713 | ||
82135 |
Hypothetical protein | SGT6248 | ||
84294 |
Hypothetical protein | SGT6340 | ||
85293 |
Hypothetical protein | SGT5112 | ||
85400 |
Hypothetical protein | SGT4427 | ||
| BAC F11L15 | gi:5729703 | 2266 |
Pale cress gene PAC | SGT6920 |
8840 |
Similarity to predicted Arabidopsis proteins | SGT6780 | ||
| BAC F13H10 | gi:3894179 | 69303 |
Hypothetical protein | SGT4750 |
| BAC F13J11 | gi:4726109 | 64702 |
Putative somatic embryogenesis receptor-like kinase | SGT5354 |
| BAC F13M22 | gi:3236234 | 62145 |
Putative phosphoribosylaminoimidazole carboxylase | SGT4915 |
| BAC F13P17 | gi:3337347 | 2030 |
Putative protein kinase | SGT4868 |
24022 |
Hypothetical protein | SGT4456 | ||
38984 |
SGT5094 | |||
47880 |
SGT1696 | |||
50230 |
cDNA clone 205A11T7 | SGT3722 | ||
50840 |
Hypothetical protein | SGT4173 | ||
| BAC F16B22 | gi:3341671 | 30381 |
SGT5203 | |
20300 |
Putative zinc finger protein | SGT5021 | ||
? |
Putative cellulase | SGT4832 | ||
| BAC F16M14 | gi:3335356 | 59405 |
CAX1, which encodes a high affinity calcium antiporter | SGT4104 |
| BAC F16P2 | gi:3980374 | 65744 |
SGT5171 | |
120117 |
SGT3423 | |||
| BAC F17A22 | gi:3738275 | 18935 |
Hypothetical protein | SGT1191 |
23323 |
Hypothetical protein | SGT5654 | ||
37790 |
cDNA clones 97E18T7 210L3T7 | SGT4101 | ||
93725 |
Hypothetical protein | SGT2765 | ||
| BAC F17K2 | gi:2979540 | 51782 |
SGT4970 | |
| BAC F19I3 | gi:3033373 | 2168 |
Hypothetical protein | SGT4530 |
2180 |
Hypothetical protein | SGT4533 | ||
5500 |
Putative berberine bridge enzyme | SGT3441 | ||
27486 |
SGT5238 | |||
29060 |
SGT5682 | |||
35625 |
SGT1706 | |||
57600 |
Hypothetical protein | SGT2837 | ||
| BAC F20M17 | gi:4887740 | 26723 |
SGT6426 | |
89198 |
Putative indole-3-acetate beta-glucosyltransferase | SGT5139 | ||
| BAC F23H14 | gi:5870284 | Weak similarity to yeast membrane protein PTM1 precursor | SGT5414 | |
| BAC F24H14 | gi:4217996 | 79440 |
Putative protein kinase | SGT6568 |
| BAC F26C24 | gi:3252804 | 30960 |
SGT2966 | |
| BAC F26H11 | gi:4803919 | 75900 |
SGT6602 | |
| BAC F27D4 | gi:4115370 | 53524 |
Putative limonene cyclase | SGT4004 |
| BAC F28I8 | gi:4544405 | 24560 |
Hypothetical protein | SET1022 |
| BAC T06D20 | gi:1871173 | 66890 |
SGT4690 | |
| BAC T08I13 | gi:2275194 | 3840 |
Similarity to Oryza sativa water stress-induced protein WSI76, cDNA 107N1T7 | SGT4041 |
| BAC T1D16 | gi:3075383 | 21826 |
G protein alpha subunit 1, (GPA1) | SGT5667 |
| BAC T2G17 | gi:4580454 | 51825 |
SGT5951 | |
| BAC T3A4 | gi:3831437 | 27730 |
SGT4076 | |
| BAC T3F17 | gi:3702315 | 10970 |
SGT4698 | |
| BAC T3K9 | gi:3402695 | 24900 |
Hypothetical protein | SGT4705 |
| BAC T4C15 | gi:3668073 | 6545 |
mRNA for LEA D113 type2 protein | SGT3064 |
32830 |
Hypothetical protein | SGT3118 | ||
85650 |
Hypothetical protein | SGT3502 | ||
| BAC T6P5 | gi:4006815 | 13875 |
Putative translation initiation factor eIF-2B, alpha subunit | SGT5299 |
| BAC T7F6 | gi:3928074 | 78790 |
SGT5301 | |
| BAC T8O11 | gi:4220468 | 11730 |
Hypothetical protein | SGT6348 |
15733 |
SGT5754 | |||
17350 |
Hypothetical protein | SGT6484 | ||
34657 |
Similarity to cleavage and polyadenylation specifity factor | SGT4559 | ||
38445 |
Similarity to cleavage and polyadenylation specifity factor | SGT1922 | ||
77403 |
Putative beta-1,3-glucanase | SGT85 | ||
| BAC T9D9 | gi:3150395 | 38847 |
Homologous to Arabidopsis anter-specific proline-rich protein (APG) | SET1059 |
40700 |
SGT22 | |||
57890 |
Hypothetical protein | SGT5163 | ||
| BAC T9J22 | gi:2739359 | 5450 |
Putative peroxisome assembly protein, PER8 | SGT3777 |
| BAC T9J23 | gi:4249393 | 43740 |
Weak similarity to Zea mays CRP1 | SGT6526 |
53114 |
cDNA clone 92E15T7 | SGT4163 | ||
72418 |
Hypothetical protein | SGT4071 | ||
| BAC T10F5 | gi:4558656 | 40616 |
Putative malate oxidoreductase (NAD) | SGT6246 |
40770 |
Putative malate oxidoreductase (NAD) | SGT6035 | ||
| BAC T11A7 | gi:2335089 | 42880 |
cDNA clone 89I22T7 & 120H1T7 | SGT4430 |
| BAC T13E11 | gi:4309747 | 30953 |
Putative transposase | SGT4730 |
30960 |
Putative transposase | SGT5725 | ||
30986 |
Putative transposase | SGT4985 | ||
| BAC T13L16 | gi:2708736 | 13141 |
GT3746 | |
66610 |
similar to Z. mays physical impedence protein IIG2 | SGT6531 | ||
| BAC T13P21 | gi:4263813 | 23941 |
cDNA clone 82C1T7; 166F9T7; 204I18T7. | SGT4080 |
| BAC T14G11 | gi:2342717 | 28407 |
SGT5112 | |
49860 |
Hypothetical protein | SGT3669 | ||
| BAC T14P1 | gi:4895233 | 24888 |
SGT6197 | |
| BAC T16B12 | gi:3746057 | 30036 |
Hypothetical protein | SGT4444 |
| BAC T16F16 | gi:3894156 | 1433 |
Putative protein kinase | SGT5281 |
11280 |
Hypothetical protein | SGT5248 | ||
11530 |
Hypothetical protein | SGT4801 | ||
15545 |
SGT4468 | |||
19910 |
SGT5940 | |||
34600 |
similar to phloem-specific lectin | SGT6639 | ||
35547 |
Similarity to phloem-specific lectin | SGT3257 | ||
37130 |
SGT4335 | |||
| BAC T17M13 | gi:3461810 | 15240 |
SGT7149 | |
21944 |
Hypothetical protein | SGT5362 | ||
| BAC T18E12 | gi:3548797 | 32830 |
SGT3557 | |
| BAC T20F6 | gi:2947056 | 25790 |
Putative membrane protein | SGT4796 |
| BAC T20F21 | gi:4263774 | 56639 |
cDNA clones 178H8T7 and 178H9T7; putative glucosyltransferase | SGT4425 |
| BAC T20K9 | gi:3445196 | 32782 |
GT4730 | |
54580 |
SGT1958 | |||
| BAC T24P15 | gi:2673901 | 41310 |
Hypothetical protein | SGT4698 |
| BAC T26B15 | gi:3298532 | 71915 |
Hypothetical protein | SGT4091 |
| BAC T26I20 | gi:3650026 | 15170 |
cDNA clone VBVHF04 | SGT4036 |
15174 |
cDNA clone VBVHF04 | SGT10049 | ||
73425 |
Similarity to auxin-responsive protein GH3 | SGT4174 | ||
74340 |
Similarity to auxin-responsive protein GH3 | SGT736 | ||
| BAC T26J13 | gi:3241939 | 14984 |
Hypothetical protein | SGT5133 |
| BAC T29F13 | gi:3132469 | 5918 |
FAH1 which encodes fatty acid hydroxylase | SGT4272 |
13215 |
Putative protein phosphatase 2C | SGT4978 | ||
28627 |
ATHB-14, which encodes homeobox protein | GT4606 | ||
34490 |
SGT4074 | |||
37250 |
Similarity to proline-rich protein | SGT4295 | ||
