Supplemental Data

Files in this Data Supplement:

• Supplemental Figure 1 - Distribution of all differentially expressed genes within functional categories.
• Supplemental Figure 2 - Distribution of differentially expressed genes of three functional categories within functional sub-categories.
• Supplemental Figure 3 - Verification of differentially expressed genes by quantitative RT-PCR after Affymetrix ATH1 microarray analysis.
• Supplemental Figure 4 - Verification of reproducibility of Affymetrix ATH1 microarray analysis.
• Supplemental Figure 5 - Comparison of expression values of all Affymetrix ATH1 microarray slides applying scatter plot analysis.
• Supplemental Table 1 - Differentially expressed genes, upregulated in Agrobacterium tumefaciens-induced tumors of Arabidopsis thaliana.
• Supplemental Table 2 - Differentially expressed genes down-regulated in Agrobacterium tumefaciens-induced tumors of Arabidopsis thaliana.
• Supplemental Table 3 - Three sub-tables of differentially expressed genes of Agrobacterium tumefaciens-induced Arabidopsis tumors versus tumor-free inflorescence stalk tissue.
• Supplemental Table 4 - Functional categories of differentially expressed genes calculated from Arabidopsis tumors induced by Agrobacterium tumefaciens versus reference inflorescence stalks.
• Supplemental Table 5 - Sub-categories of differentially expressed genes of the functional category “primary metabolism”.
• Supplemental Table 6 - Sub-categories of differentially expressed genes of the functional category “photosynthesis”.
• Supplemental Table 7 - Sub-categories of differentially expressed genes of the functional category “transport”.
• Supplemental Table 8 - Comparison of tumor- and phytohormone-dependent gene expression.