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Table of Contents

The Plant Cell: 27 (3)
Mar 2015
  • A
  • B
  • C
  • D
  • E
  • F
  • G
  • H
  • I
  • J
  • K
  • L
  • M
  • N
  • O
  • P
  • Q
  • R
  • S
  • T
  • U
  • V
  • W
  • X
  • Y
  • Z

A

  1. Aderhold, Christin

    1. Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Open Access
      Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Rucha Karnik, Ben Zhang, Sakharam Waghmare, Christin Aderhold, Christopher Grefen, Michael R. Blatt
      Plant Cell Mar 2015, 27 (3) 675-694; DOI: https://doi.org/10.1105/tpc.114.134429

      A protein that regulates secretion targets one of two homologous and functionally overlapping SNARE (vesicle trafficking) proteins in Arabidopsis to drive traffic and is important for recycling of the SNARE complex.

  2. Alseekh, Saleh

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  3. Ané, Jean-Michel

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  4. Arakaki, Angela M.

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

B

  1. Bacic, Antony

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  2. Badieyan, Somayesadat

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  3. Bain, Melissa P.

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  4. Baum, Thomas J.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  5. Bevan, Michael W.

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

  6. Blatt, Michael R.

    1. Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Open Access
      Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Rucha Karnik, Ben Zhang, Sakharam Waghmare, Christin Aderhold, Christopher Grefen, Michael R. Blatt
      Plant Cell Mar 2015, 27 (3) 675-694; DOI: https://doi.org/10.1105/tpc.114.134429

      A protein that regulates secretion targets one of two homologous and functionally overlapping SNARE (vesicle trafficking) proteins in Arabidopsis to drive traffic and is important for recycling of the SNARE complex.

  7. Blazier, J. Chris

    1. Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      You have accessRestricted Access
      Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      Jin Zhang, Tracey A. Ruhlman, Jamal Sabir, J. Chris Blazier, Robert K. Jansen
      Plant Cell Mar 2015, 27 (3) 563-573; DOI: https://doi.org/10.1105/tpc.114.134353

      Evolutionary analysis in Geraniaceae reveals correlation of rates between plastid- and nuclear-encoded genes, providing a plausible mechanism for plastome-genome incompatibility in this family.

  8. Boerjan, Wout

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  9. Bozhkov, Peter V.

    1. Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      You have accessRestricted Access
      Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      Emilio Gutierrez-Beltran, Panagiotis N. Moschou, Andrei P. Smertenko, Peter V. Bozhkov
      Plant Cell Mar 2015, 27 (3) 926-943; DOI: https://doi.org/10.1105/tpc.114.134494

      Evolutionarily conserved Tudor Staphylococcal Nuclease is essential for maintaining the integrity of stress granules and processing bodies and for stress-induced mRNA decapping.

  10. Brewster, Di

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  11. Bulley, Sean M.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  12. Burnett, William J.

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

C

  1. Cai, Chunmei

    1. Evolutionary Patterns and Coevolutionary Consequences of <em>MIRNA</em> Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      You have accessRestricted Access
      Evolutionary Patterns and Coevolutionary Consequences of MIRNA Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      Meixia Zhao, Blake C. Meyers, Chunmei Cai, Wei Xu, Jianxin Ma
      Plant Cell Mar 2015, 27 (3) 546-562; DOI: https://doi.org/10.1105/tpc.15.00048

      A genome-wide analysis and interspecific comparison of MIRNA genes revealed the patterns of MIRNA gene evolution subsequent to the recent whole-genome duplication event in soybean.

  2. Castandet, Benoît

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  3. Cha, Joon-Yung

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  4. Chen, Aimin

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  5. Chen, Jieyu

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  6. Chen, Li-Qing

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  7. Chen, Liangliang

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

  8. Chen, She

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  9. Chen, Sixue

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  10. Chen, Zhongzhou

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  11. Cheng, Cheng

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  12. Cheng, Yanbing

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  13. Condon, Ciarán

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  14. Cottaz, Sylvain

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  15. Cui, Rongfeng

    1. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

D

  1. Dare, Andrew P.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  2. Davis, Eric L.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  3. Dénarié, Jean

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  4. Dima, Oana

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  5. Doblin, Monika S.

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  6. Drews, Gary N.

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  7. Du, Liang

    1. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

  8. Dumenil, Jack

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

F

  1. Feng, Dongru

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  2. Fernie, Alisdair R.

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  3. Fort, Sébastien

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  4. Frommer, Wolf B.

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

G

  1. Gao, Mingxing

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  2. Giavalisco, Patrick

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  3. Gilet, Laetitia

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  4. Gobbato, Enrico

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  5. Granqvist, Emma

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  6. Grefen, Christopher

    1. Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Open Access
      Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Rucha Karnik, Ben Zhang, Sakharam Waghmare, Christin Aderhold, Christopher Grefen, Michael R. Blatt
      Plant Cell Mar 2015, 27 (3) 675-694; DOI: https://doi.org/10.1105/tpc.114.134429

      A protein that regulates secretion targets one of two homologous and functionally overlapping SNARE (vesicle trafficking) proteins in Arabidopsis to drive traffic and is important for recycling of the SNARE complex.

  7. Guo, Hui-Shan

    1. Cleavage of <em>INDOLE-3-ACETIC ACID INDUCIBLE28</em> mRNA by MicroRNA847 Upregulates Auxin Signaling to Modulate Cell Proliferation and Lateral Organ Growth in Arabidopsis
      You have accessRestricted Access
      Cleavage of INDOLE-3-ACETIC ACID INDUCIBLE28 mRNA by MicroRNA847 Upregulates Auxin Signaling to Modulate Cell Proliferation and Lateral Organ Growth in Arabidopsis
      Jing-Jing Wang, Hui-Shan Guo
      Plant Cell Mar 2015, 27 (3) 574-590; DOI: https://doi.org/10.1105/tpc.15.00101

      A microRNA-auxin/indole acetic acid repressor module regulates the extent of cell competence, thereby affecting the duration of cell proliferation and the development of lateral organs.

  8. Guo, Jinghua

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  9. Guo, Yan

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  10. Gutierrez-Beltran, Emilio

    1. Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      You have accessRestricted Access
      Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      Emilio Gutierrez-Beltran, Panagiotis N. Moschou, Andrei P. Smertenko, Peter V. Bozhkov
      Plant Cell Mar 2015, 27 (3) 926-943; DOI: https://doi.org/10.1105/tpc.114.134494

      Evolutionarily conserved Tudor Staphylococcal Nuclease is essential for maintaining the integrity of stress granules and processing bodies and for stress-induced mRNA decapping.

H

  1. Hake, Katharina

    1. The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Open Access
      The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Susanne Matschi, Katharina Hake, Marco Herde, Bettina Hause, Tina Romeis
      Plant Cell Mar 2015, 27 (3) 591-606; DOI: https://doi.org/10.1105/tpc.15.00024

      A calcium-dependent protein kinase plays dual roles, maintaining tissue-specific phytohormone levels in adult plants without affecting defense responses and regulating defense signaling in seedlings.

  2. Hao, Jianjun

    1. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

  3. Hause, Bettina

    1. The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Open Access
      The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Susanne Matschi, Katharina Hake, Marco Herde, Bettina Hause, Tina Romeis
      Plant Cell Mar 2015, 27 (3) 591-606; DOI: https://doi.org/10.1105/tpc.15.00024

      A calcium-dependent protein kinase plays dual roles, maintaining tissue-specific phytohormone levels in adult plants without affecting defense responses and regulating defense signaling in seedlings.

  4. He, Ping

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  5. Heinzlmeir, Stephanie

    1. DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in Arabidopsis thaliana
      Julia Mergner, Stephanie Heinzlmeir, Bernhard Kuster, Claus Schwechheimer
      Plant Cell Mar 2015, 27 (3) 741-753; DOI: https://doi.org/10.1105/tpc.114.135996

      Mutants of an Arabidopsis DENEDDYLASE1 accumulate a broad range of NEDD8 conjugates, including AUXIN RESISTANT1, thus showing the existence of many NEDD8 conjugates in addition to the cullins.

  6. Hellens, Roger P.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  7. Herde, Marco

    1. The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Open Access
      The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Susanne Matschi, Katharina Hake, Marco Herde, Bettina Hause, Tina Romeis
      Plant Cell Mar 2015, 27 (3) 591-606; DOI: https://doi.org/10.1105/tpc.15.00024

      A calcium-dependent protein kinase plays dual roles, maintaining tissue-specific phytohormone levels in adult plants without affecting defense responses and regulating defense signaling in seedlings.

  8. Hewezi, Tarek

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  9. Higdon, Andrea

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  10. Ho, Yin Ying

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  11. Hofmann, Nancy R.

    1. Downstream of a Kinase Cascade: A Trihelix Transcription Factor Represses Immune Genes
      You have accessRestricted Access
      Downstream of a Kinase Cascade: A Trihelix Transcription Factor Represses Immune Genes
      Nancy R. Hofmann
      Plant Cell Mar 2015, 27 (3) 481; DOI: https://doi.org/10.1105/tpc.15.00197
  12. Hotto, Amber M.

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  13. Huh, Jung-Hyun

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  14. Hussey, Richard S.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

I

  1. Izawa, Takeshi

    1. Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Open Access
      Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Jun Matsuzaki, Yoshihiro Kawahara, Takeshi Izawa
      Plant Cell Mar 2015, 27 (3) 633-648; DOI: https://doi.org/10.1105/tpc.114.135582

      Expression of circadian clock genes in rice, individually responding to given field conditions, coordinately encode punctual internal time irrespective of weather, daylength, or developmental stage.

J

  1. Jansen, Robert K.

    1. Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      You have accessRestricted Access
      Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      Jin Zhang, Tracey A. Ruhlman, Jamal Sabir, J. Chris Blazier, Robert K. Jansen
      Plant Cell Mar 2015, 27 (3) 563-573; DOI: https://doi.org/10.1105/tpc.114.134353

      Evolutionary analysis in Geraniaceae reveals correlation of rates between plastid- and nuclear-encoded genes, providing a plausible mechanism for plastome-genome incompatibility in this family.

  2. Jiang, Daohong

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  3. Jiang, Shan

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  4. Jin, Honglei

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  5. Juvale, Parijat S.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

K

  1. Karnik, Rucha

    1. Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Open Access
      Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Rucha Karnik, Ben Zhang, Sakharam Waghmare, Christin Aderhold, Christopher Grefen, Michael R. Blatt
      Plant Cell Mar 2015, 27 (3) 675-694; DOI: https://doi.org/10.1105/tpc.114.134429

      A protein that regulates secretion targets one of two homologous and functionally overlapping SNARE (vesicle trafficking) proteins in Arabidopsis to drive traffic and is important for recycling of the SNARE complex.

  2. Kawahara, Yoshihiro

    1. Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Open Access
      Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Jun Matsuzaki, Yoshihiro Kawahara, Takeshi Izawa
      Plant Cell Mar 2015, 27 (3) 633-648; DOI: https://doi.org/10.1105/tpc.114.135582

      Expression of circadian clock genes in rice, individually responding to given field conditions, coordinately encode punctual internal time irrespective of weather, daylength, or developmental stage.

  3. Kim, Hoon

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  4. Kim, Woe-Yeon

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  5. Kleessen, Sabrina

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  6. Kliebenstein, Daniel J.

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  7. Kong, Zhaosheng

    1. ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      You have accessRestricted Access
      ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      Guangheng Wu, Simu Liu, Yaofei Zhao, Wei Wang, Zhaosheng Kong, Dingzhong Tang
      Plant Cell Mar 2015, 27 (3) 857-873; DOI: https://doi.org/10.1105/tpc.114.134668

      Arabidopsis EDR4 interacts with CLATHRIN HEAVY CHAIN2 and EDR1 and negatively affects plant immunity by regulating the relocation of EDR1 to the penetration site of powdery mildew infection.

  8. Kuster, Bernhard

    1. DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in Arabidopsis thaliana
      Julia Mergner, Stephanie Heinzlmeir, Bernhard Kuster, Claus Schwechheimer
      Plant Cell Mar 2015, 27 (3) 741-753; DOI: https://doi.org/10.1105/tpc.114.135996

      Mutants of an Arabidopsis DENEDDYLASE1 accumulate a broad range of NEDD8 conjugates, including AUXIN RESISTANT1, thus showing the existence of many NEDD8 conjugates in addition to the cullins.

L

  1. Laing, William A.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  2. Lampugnani, Edwin R.

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  3. Lei, Ming-Juan

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  4. Li, Bo

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  5. Li, Changying

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  6. Li, Chaobin

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  7. Li, Guan

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  8. Li, Guannan

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  9. Li, Jie

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  10. Li, Jing

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  11. Li, Mengshu

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  12. Li, Xiaolin

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  13. Li, Yunhai

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

    2. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

  14. Li, Zhen

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  15. Lin, I Winnie

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  16. Liu, Bing

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  17. Liu, Jun

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  18. Liu, Juntao

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  19. Liu, Simu

    1. ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      You have accessRestricted Access
      ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      Guangheng Wu, Simu Liu, Yaofei Zhao, Wei Wang, Zhaosheng Kong, Dingzhong Tang
      Plant Cell Mar 2015, 27 (3) 857-873; DOI: https://doi.org/10.1105/tpc.114.134668

      Arabidopsis EDR4 interacts with CLATHRIN HEAVY CHAIN2 and EDR1 and negatively affects plant immunity by regulating the relocation of EDR1 to the penetration site of powdery mildew infection.

  20. Liu, Yingyao

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  21. Liu, Yu

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  22. Lloyd, Alan

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  23. Lockhart, Jennifer

    1. Gaming the System: How Hungry Nematodes Get Plants to Produce Feeding Sites for Them
      You have accessRestricted Access
      Gaming the System: How Hungry Nematodes Get Plants to Produce Feeding Sites for Them
      Jennifer Lockhart
      Plant Cell Mar 2015, 27 (3) 482; DOI: https://doi.org/10.1105/tpc.15.00129
    2. Uncovering the Unexpected Site of Biosynthesis of a Major Cell Wall Component in Grasses
      You have accessRestricted Access
      Uncovering the Unexpected Site of Biosynthesis of a Major Cell Wall Component in Grasses
      Jennifer Lockhart
      Plant Cell Mar 2015, 27 (3) 483; DOI: https://doi.org/10.1105/tpc.15.00177
  24. Logan, Kyle O.

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  25. Londoño, Alejandra

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  26. Lu, Yaru

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

  27. Luo, Da

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  28. Luo, Li

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  29. Lv, Yuanda

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

M

  1. Ma, Chuang

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  2. Ma, Jian Feng

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  3. Ma, Jianxin

    1. Evolutionary Patterns and Coevolutionary Consequences of <em>MIRNA</em> Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      You have accessRestricted Access
      Evolutionary Patterns and Coevolutionary Consequences of MIRNA Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      Meixia Zhao, Blake C. Meyers, Chunmei Cai, Wei Xu, Jianxin Ma
      Plant Cell Mar 2015, 27 (3) 546-562; DOI: https://doi.org/10.1105/tpc.15.00048

      A genome-wide analysis and interspecific comparison of MIRNA genes revealed the patterns of MIRNA gene evolution subsequent to the recent whole-genome duplication event in soybean.

  4. Mach, Jennifer

    1. Clarifying the Opaque: Identification of Direct Targets of Maize Opaque2
      You have accessRestricted Access
      Clarifying the Opaque: Identification of Direct Targets of Maize Opaque2
      Jennifer Mach
      Plant Cell Mar 2015, 27 (3) 484; DOI: https://doi.org/10.1105/tpc.15.00156
  5. Macknight, Richard C.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  6. Maier, Tom R.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  7. Maillet, Fabienne

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  8. Martínez-Sánchez, Marcela

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  9. Matschi, Susanne

    1. The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Open Access
      The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Susanne Matschi, Katharina Hake, Marco Herde, Bettina Hause, Tina Romeis
      Plant Cell Mar 2015, 27 (3) 591-606; DOI: https://doi.org/10.1105/tpc.15.00024

      A calcium-dependent protein kinase plays dual roles, maintaining tissue-specific phytohormone levels in adult plants without affecting defense responses and regulating defense signaling in seedlings.

  10. Matsuzaki, Jun

    1. Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Open Access
      Punctual Transcriptional Regulation by the Rice Circadian Clock under Fluctuating Field Conditions
      Jun Matsuzaki, Yoshihiro Kawahara, Takeshi Izawa
      Plant Cell Mar 2015, 27 (3) 633-648; DOI: https://doi.org/10.1105/tpc.114.135582

      Expression of circadian clock genes in rice, individually responding to given field conditions, coordinately encode punctual internal time irrespective of weather, daylength, or developmental stage.

  11. McFarlane, Heather E.

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  12. Mei, Bing

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  13. Mergner, Julia

    1. DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in Arabidopsis thaliana
      Julia Mergner, Stephanie Heinzlmeir, Bernhard Kuster, Claus Schwechheimer
      Plant Cell Mar 2015, 27 (3) 741-753; DOI: https://doi.org/10.1105/tpc.114.135996

      Mutants of an Arabidopsis DENEDDYLASE1 accumulate a broad range of NEDD8 conjugates, including AUXIN RESISTANT1, thus showing the existence of many NEDD8 conjugates in addition to the cullins.

  14. Meyers, Blake C.

    1. Evolutionary Patterns and Coevolutionary Consequences of <em>MIRNA</em> Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      You have accessRestricted Access
      Evolutionary Patterns and Coevolutionary Consequences of MIRNA Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      Meixia Zhao, Blake C. Meyers, Chunmei Cai, Wei Xu, Jianxin Ma
      Plant Cell Mar 2015, 27 (3) 546-562; DOI: https://doi.org/10.1105/tpc.15.00048

      A genome-wide analysis and interspecific comparison of MIRNA genes revealed the patterns of MIRNA gene evolution subsequent to the recent whole-genome duplication event in soybean.

  15. Miller, J. Benjamin

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  16. Mitchum, Melissa G.

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  17. Miyagishima, Shin-ya

    1. Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Open Access
      Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Kumiko Okazaki, Shin-ya Miyagishima, Hajime Wada
      Plant Cell Mar 2015, 27 (3) 663-674; DOI: https://doi.org/10.1105/tpc.115.136234

      Phosphatidylinositol 4-phosphate binds specifically to PDV1 and PDV2, the components of the chloroplast division apparatus, and plays an important role as a negative regulator of chloroplast division.

  18. Morreel, Kris

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  19. Morris, Richard J.

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  20. Moschou, Panagiotis N.

    1. Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      You have accessRestricted Access
      Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      Emilio Gutierrez-Beltran, Panagiotis N. Moschou, Andrei P. Smertenko, Peter V. Bozhkov
      Plant Cell Mar 2015, 27 (3) 926-943; DOI: https://doi.org/10.1105/tpc.114.134494

      Evolutionarily conserved Tudor Staphylococcal Nuclease is essential for maintaining the integrity of stress granules and processing bodies and for stress-induced mRNA decapping.

  21. Mueller-Roeber, Bernd

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  22. Mysore, Kirankumar S.

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

N

  1. Nikoloski, Zoran

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  2. Nixon, Neesha M.

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  3. Nussaume, Laurent

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

O

  1. Okazaki, Kumiko

    1. Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Open Access
      Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Kumiko Okazaki, Shin-ya Miyagishima, Hajime Wada
      Plant Cell Mar 2015, 27 (3) 663-674; DOI: https://doi.org/10.1105/tpc.115.136234

      Phosphatidylinositol 4-phosphate binds specifically to PDV1 and PDV2, the components of the chloroplast division apparatus, and plays an important role as a negative regulator of chloroplast division.

  2. Oldroyd, Giles E.D.

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  3. Omranian, Nooshin

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

P

  1. Paz-Ares, Javier

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  2. Peng, Yuancheng

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

  3. Piya, Sarbottam

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  4. Pleban, Tzili

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

Q

  1. Qi, Weiwei

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  2. Qiao, Zhenyi

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  3. Qu, Xiao-Qing

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

R

  1. Rakotondraibe, Liva Harinantenaina

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  2. Ralph, John

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  3. Rambani, Aditi

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  4. Rassam, Maysoon

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  5. Rice, J. Hollis

    1. The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      You have accessRestricted Access
      The Cyst Nematode Effector Protein 10A07 Targets and Recruits Host Posttranslational Machinery to Mediate Its Nuclear Trafficking and to Promote Parasitism in Arabidopsis
      Tarek Hewezi, Parijat S. Juvale, Sarbottam Piya, Tom R. Maier, Aditi Rambani, J. Hollis Rice, Melissa G. Mitchum, Eric L. Davis, Richard S. Hussey, Thomas J. Baum
      Plant Cell Mar 2015, 27 (3) 891-907; DOI: https://doi.org/10.1105/tpc.114.135327

      An Arabidopsis kinase interacts with and phosphorylates a cyst nematode effector protein, which then translocates to the nucleus and interacts with a transcription factor to enhance pathogenicity.

  6. Romeis, Tina

    1. The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Open Access
      The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific, Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis
      Susanne Matschi, Katharina Hake, Marco Herde, Bettina Hause, Tina Romeis
      Plant Cell Mar 2015, 27 (3) 591-606; DOI: https://doi.org/10.1105/tpc.15.00024

      A calcium-dependent protein kinase plays dual roles, maintaining tissue-specific phytohormone levels in adult plants without affecting defense responses and regulating defense signaling in seedlings.

  7. Ruhlman, Tracey A.

    1. Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      You have accessRestricted Access
      Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      Jin Zhang, Tracey A. Ruhlman, Jamal Sabir, J. Chris Blazier, Robert K. Jansen
      Plant Cell Mar 2015, 27 (3) 563-573; DOI: https://doi.org/10.1105/tpc.114.134353

      Evolutionary analysis in Geraniaceae reveals correlation of rates between plastid- and nuclear-encoded genes, providing a plausible mechanism for plastome-genome incompatibility in this family.

S

  1. Sabir, Jamal

    1. Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      You have accessRestricted Access
      Coordinated Rates of Evolution between Interacting Plastid and Nuclear Genes in Geraniaceae
      Jin Zhang, Tracey A. Ruhlman, Jamal Sabir, J. Chris Blazier, Robert K. Jansen
      Plant Cell Mar 2015, 27 (3) 563-573; DOI: https://doi.org/10.1105/tpc.114.134353

      Evolutionary analysis in Geraniaceae reveals correlation of rates between plastid- and nuclear-encoded genes, providing a plausible mechanism for plastome-genome incompatibility in this family.

  2. Samain, Eric

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  3. Samuels, A. Lacey

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  4. Schumaker, Karen S.

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  5. Schwechheimer, Claus

    1. DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      DENEDDYLASE1 Deconjugates NEDD8 from Non-Cullin Protein Substrates in Arabidopsis thaliana
      Julia Mergner, Stephanie Heinzlmeir, Bernhard Kuster, Claus Schwechheimer
      Plant Cell Mar 2015, 27 (3) 741-753; DOI: https://doi.org/10.1105/tpc.114.135996

      Mutants of an Arabidopsis DENEDDYLASE1 accumulate a broad range of NEDD8 conjugates, including AUXIN RESISTANT1, thus showing the existence of many NEDD8 conjugates in addition to the cullins.

  6. Scossa, Federico

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  7. Shan, Libo

    1. Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      You have accessRestricted Access
      Phosphorylation of Trihelix Transcriptional Repressor ASR3 by MAP KINASE4 Negatively Regulates Arabidopsis Immunity
      Bo Li, Shan Jiang, Xiao Yu, Cheng Cheng, Sixue Chen, Yanbing Cheng, Joshua S. Yuan, Daohong Jiang, Ping He, Libo Shan
      Plant Cell Mar 2015, 27 (3) 839-856; DOI: https://doi.org/10.1105/tpc.114.134809

      A trihelix transcription factor downstream of a MAP kinase cascade negatively regulates plant immune gene expression.

  8. Smertenko, Andrei P.

    1. Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      You have accessRestricted Access
      Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis
      Emilio Gutierrez-Beltran, Panagiotis N. Moschou, Andrei P. Smertenko, Peter V. Bozhkov
      Plant Cell Mar 2015, 27 (3) 926-943; DOI: https://doi.org/10.1105/tpc.114.134494

      Evolutionarily conserved Tudor Staphylococcal Nuclease is essential for maintaining the integrity of stress granules and processing bodies and for stress-induced mRNA decapping.

  9. Sobrado, Pablo

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  10. Sohrabi, Reza

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  11. Song, Rentao

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  12. Sosso, Davide

    1. A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Open Access
      A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
      Li-Qing Chen, I Winnie Lin, Xiao-Qing Qu, Davide Sosso, Heather E. McFarlane, Alejandra Londoño, A. Lacey Samuels, Wolf B. Frommer
      Plant Cell Mar 2015, 27 (3) 607-619; DOI: https://doi.org/10.1105/tpc.114.134585

      Triple mutants of three sucrose-transporting SWEETs show reduced seed yield, indicating that multiple sucrose translocation pathways move sugar from the maternal to the filial tissues.

  13. Staehelin, Christian

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  14. Stern, David B.

    1. Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      You have accessRestricted Access
      Arabidopsis Chloroplast Mini-Ribonuclease III Participates in rRNA Maturation and Intron Recycling
      Amber M. Hotto, Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, David B. Stern
      Plant Cell Mar 2015, 27 (3) 724-740; DOI: https://doi.org/10.1105/tpc.114.134452

      Using RNA-Seq and end-mapping, we showed that two Arabidopsis Mini-III proteins, which are putative double-stranded plastid endonucleases, process rRNA, introns, and a plastid noncoding RNA.

  15. Storey, Roy

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  16. Sun, Caixia

    1. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

  17. Sun, Jongho

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

T

  1. Tang, Dingzhong

    1. ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      You have accessRestricted Access
      ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      Guangheng Wu, Simu Liu, Yaofei Zhao, Wei Wang, Zhaosheng Kong, Dingzhong Tang
      Plant Cell Mar 2015, 27 (3) 857-873; DOI: https://doi.org/10.1105/tpc.114.134668

      Arabidopsis EDR4 interacts with CLATHRIN HEAVY CHAIN2 and EDR1 and negatively affects plant immunity by regulating the relocation of EDR1 to the penetration site of powdery mildew infection.

  2. Tang, Yuanping

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  3. Thakare, Dhiraj

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  4. Tholl, Dorothea

    1. In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      You have accessRestricted Access
      In Planta Variation of Volatile Biosynthesis: An Alternative Biosynthetic Route to the Formation of the Pathogen-Induced Volatile Homoterpene DMNT via Triterpene Degradation in Arabidopsis Roots
      Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J. Kliebenstein, Pablo Sobrado, Dorothea Tholl
      Plant Cell Mar 2015, 27 (3) 874-890; DOI: https://doi.org/10.1105/tpc.114.132209

      An alternative, tissue-specific pathway yielding a common homoterpene volatile in roots is implicated in defense against soil borne pathogens, revealing plasticity in volatile homoterpene biosynthesis and function.

  5. Tohge, Takayuki

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

V

  1. Van de Meene, Allison M.L.

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  2. Vanholme, Bartel

    1. Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      You have accessRestricted Access
      Small Glycosylated Lignin Oligomers Are Stored in Arabidopsis Leaf Vacuoles
      Oana Dima, Kris Morreel, Bartel Vanholme, Hoon Kim, John Ralph, Wout Boerjan
      Plant Cell Mar 2015, 27 (3) 695-710; DOI: https://doi.org/10.1105/tpc.114.134643

      While combinatorial coupling of monolignols to oligolignols is known to occur in the apoplast, this process also occurs in the cytoplasm, followed by glycosylation and import into the vacuole.

  3. Venkateshwaran, Muthusubramanian

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

W

  1. Wada, Hajime

    1. Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Open Access
      Phosphatidylinositol 4-Phosphate Negatively Regulates Chloroplast Division in Arabidopsis
      Kumiko Okazaki, Shin-ya Miyagishima, Hajime Wada
      Plant Cell Mar 2015, 27 (3) 663-674; DOI: https://doi.org/10.1105/tpc.115.136234

      Phosphatidylinositol 4-phosphate binds specifically to PDV1 and PDV2, the components of the chloroplast division apparatus, and plays an important role as a negative regulator of chloroplast division.

  2. Waghmare, Sakharam

    1. Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Open Access
      Binding of SEC11 Indicates Its Role in SNARE Recycling after Vesicle Fusion and Identifies Two Pathways for Vesicular Traffic to the Plasma Membrane
      Rucha Karnik, Ben Zhang, Sakharam Waghmare, Christin Aderhold, Christopher Grefen, Michael R. Blatt
      Plant Cell Mar 2015, 27 (3) 675-694; DOI: https://doi.org/10.1105/tpc.114.134429

      A protein that regulates secretion targets one of two homologous and functionally overlapping SNARE (vesicle trafficking) proteins in Arabidopsis to drive traffic and is important for recycling of the SNARE complex.

  3. Wang, Daisy

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  4. Wang, Dongfang

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  5. Wang, Fei

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  6. Wang, Guoqiang

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  7. Wang, Hong-Bin

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  8. Wang, Jinfa

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  9. Wang, Jing-Jing

    1. Cleavage of <em>INDOLE-3-ACETIC ACID INDUCIBLE28</em> mRNA by MicroRNA847 Upregulates Auxin Signaling to Modulate Cell Proliferation and Lateral Organ Growth in Arabidopsis
      You have accessRestricted Access
      Cleavage of INDOLE-3-ACETIC ACID INDUCIBLE28 mRNA by MicroRNA847 Upregulates Auxin Signaling to Modulate Cell Proliferation and Lateral Organ Growth in Arabidopsis
      Jing-Jing Wang, Hui-Shan Guo
      Plant Cell Mar 2015, 27 (3) 574-590; DOI: https://doi.org/10.1105/tpc.15.00101

      A microRNA-auxin/indole acetic acid repressor module regulates the extent of cell competence, thereby affecting the duration of cell proliferation and the development of lateral organs.

  10. Wang, Peng

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  11. Wang, Qi

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  12. Wang, Qian

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  13. Wang, Wei

    1. ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      You have accessRestricted Access
      ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      Guangheng Wu, Simu Liu, Yaofei Zhao, Wei Wang, Zhaosheng Kong, Dingzhong Tang
      Plant Cell Mar 2015, 27 (3) 857-873; DOI: https://doi.org/10.1105/tpc.114.134668

      Arabidopsis EDR4 interacts with CLATHRIN HEAVY CHAIN2 and EDR1 and negatively affects plant immunity by regulating the relocation of EDR1 to the penetration site of powdery mildew infection.

  14. Wang, Xiangfeng

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  15. Wang, Yan-Zhang

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  16. Wang, Yifeng

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  17. Wen, Jiangqi

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  18. Wendenberg, Regina

    1. Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Open Access
      Identification and Mode of Inheritance of Quantitative Trait Loci for Secondary Metabolite Abundance in Tomato
      Saleh Alseekh, Takayuki Tohge, Regina Wendenberg, Federico Scossa, Nooshin Omranian, Jie Li, Sabrina Kleessen, Patrick Giavalisco, Tzili Pleban, Bernd Mueller-Roeber, Dani Zamir, Zoran Nikoloski, Alisdair R. Fernie
      Plant Cell Mar 2015, 27 (3) 485-512; DOI: https://doi.org/10.1105/tpc.114.132266

      Metabolite QTL for secondary metabolism in a Solanum pennelli introgression line population show different modes of inheritance and network properties linking the traits.

  19. Wiley-Kalil, Audrey

    1. Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Open Access
      Activation of Symbiosis Signaling by Arbuscular Mycorrhizal Fungi in Legumes and Rice
      Jongho Sun, J. Benjamin Miller, Emma Granqvist, Audrey Wiley-Kalil, Enrico Gobbato, Fabienne Maillet, Sylvain Cottaz, Eric Samain, Muthusubramanian Venkateshwaran, Sébastien Fort, Richard J. Morris, Jean-Michel Ané, Jean Dénarié, Giles E.D. Oldroyd
      Plant Cell Mar 2015, 27 (3) 823-838; DOI: https://doi.org/10.1105/tpc.114.131326

      Arbuscular mycorrhizal fungi produce a variety of signaling molecules that are shown to promote symbiosis signaling in a range of plant species.

  20. Wilson, Sarah M.

    1. Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-<span class="sc">d</span>-Glucan in Grasses
      Open Access
      Determining the Subcellular Location of Synthesis and Assembly of the Cell Wall Polysaccharide (1,3; 1,4)-β-d-Glucan in Grasses
      Sarah M. Wilson, Yin Ying Ho, Edwin R. Lampugnani, Allison M.L. Van de Meene, Melissa P. Bain, Antony Bacic, Monika S. Doblin
      Plant Cell Mar 2015, 27 (3) 754-771; DOI: https://doi.org/10.1105/tpc.114.135970

      Despite the paradigm that noncellulosic cell wall polysaccharides are synthesized in the Golgi, compelling evidence suggests that (1,3;1,4)-β-d-glucans are assembled at the plasma membrane.

  21. Wright, Michele A.

    1. An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      You have accessRestricted Access
      An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis
      William A. Laing, Marcela Martínez-Sánchez, Michele A. Wright, Sean M. Bulley, Di Brewster, Andrew P. Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C. Macknight, Roger P. Hellens
      Plant Cell Mar 2015, 27 (3) 772-786; DOI: https://doi.org/10.1105/tpc.114.133777

      Feedback regulation of the key gene in the ascorbate biosynthesis pathway, GDP Galactose Phosphorylase, is controlled at the level of translation by an upstream open reading frame with a noncanonical initiation codon.

  22. Wu, Guangheng

    1. ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      You have accessRestricted Access
      ENHANCED DISEASE RESISTANCE4 Associates with CLATHRIN HEAVY CHAIN2 and Modulates Plant Immunity by Regulating Relocation of EDR1 in Arabidopsis
      Guangheng Wu, Simu Liu, Yaofei Zhao, Wei Wang, Zhaosheng Kong, Dingzhong Tang
      Plant Cell Mar 2015, 27 (3) 857-873; DOI: https://doi.org/10.1105/tpc.114.134668

      Arabidopsis EDR4 interacts with CLATHRIN HEAVY CHAIN2 and EDR1 and negatively affects plant immunity by regulating the relocation of EDR1 to the penetration site of powdery mildew infection.

  23. Wu, Ping

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  24. Wu, Yingbao

    1. The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      You have accessRestricted Access
      The Ubiquitin Receptors DA1, DAR1, and DAR2 Redundantly Regulate Endoreduplication by Modulating the Stability of TCP14/15 in Arabidopsis
      Yuancheng Peng, Liangliang Chen, Yaru Lu, Yingbao Wu, Jack Dumenil, Zhengge Zhu, Michael W. Bevan, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 649-662; DOI: https://doi.org/10.1105/tpc.114.132274

      A genetic and molecular mechanism involving the ubiquitin receptors DA1, DAR1, and DAR2 and the transcription factors TCP14 and TCP15 links cell and organ growth with the regulation of endoreduplication.

  25. Wu, Zhongchang

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

X

  1. Xiao, Han

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  2. Xie, Yajun

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  3. Xie, Zhi-Ping

    1. The Small GTPase ROP10 of <em>Medicago truncatula</em> Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      You have accessRestricted Access
      The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation
      Ming-Juan Lei, Qi Wang, Xiaolin Li, Aimin Chen, Li Luo, Yajun Xie, Guan Li, Da Luo, Kirankumar S. Mysore, Jiangqi Wen, Zhi-Ping Xie, Christian Staehelin, Yan-Zhang Wang
      Plant Cell Mar 2015, 27 (3) 806-822; DOI: https://doi.org/10.1105/tpc.114.135210

      The small GTPase ROP10 regulates the reestablishment of cell polarity, leading to root hair deformation in legumes during root nodule symbiosis.

  4. Xiong, Feng

    1. The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      You have accessRestricted Access
      The bHLH Transcription Factor bHLH104 Interacts with IAA-LEUCINE RESISTANT3 and Modulates Iron Homeostasis in Arabidopsis
      Jie Zhang, Bing Liu, Mengshu Li, Dongru Feng, Honglei Jin, Peng Wang, Jun Liu, Feng Xiong, Jinfa Wang, Hong-Bin Wang
      Plant Cell Mar 2015, 27 (3) 787-805; DOI: https://doi.org/10.1105/tpc.114.132704

      The IVc subgroup bHLH transcription factor bHLH104 interacts with ILR3 to regulate the Arabidopsis Fe deficiency responses via targeting the Ib subgroup bHLH genes and PYE expression.

  5. Xu, Ran

    1. Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing <em>KLU</em> Expression in <em>Arabidopsis thaliana</em>
      You have accessRestricted Access
      Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana
      Yueying Zhang, Liang Du, Ran Xu, Rongfeng Cui, Jianjun Hao, Caixia Sun, Yunhai Li
      Plant Cell Mar 2015, 27 (3) 620-632; DOI: https://doi.org/10.1105/tpc.114.135368

      Two transcription factors, SOD7/NGAL2 and DPA4/NGAL3, regulate seed and organ size by repressing the expression of KLU, suggesting that they are promising targets for crop improvement.

  6. Xu, Wei

    1. Evolutionary Patterns and Coevolutionary Consequences of <em>MIRNA</em> Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      You have accessRestricted Access
      Evolutionary Patterns and Coevolutionary Consequences of MIRNA Genes and MicroRNA Targets Triggered by Multiple Mechanisms of Genomic Duplications in Soybean
      Meixia Zhao, Blake C. Meyers, Chunmei Cai, Wei Xu, Jianxin Ma
      Plant Cell Mar 2015, 27 (3) 546-562; DOI: https://doi.org/10.1105/tpc.15.00048

      A genome-wide analysis and interspecific comparison of MIRNA genes revealed the patterns of MIRNA gene evolution subsequent to the recent whole-genome duplication event in soybean.

Y

  1. Yadegari, Ramin

    1. RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Open Access
      RNA Sequencing of Laser-Capture Microdissected Compartments of the Maize Kernel Identifies Regulatory Modules Associated with Endosperm Cell Differentiation
      Junpeng Zhan, Dhiraj Thakare, Chuang Ma, Alan Lloyd, Neesha M. Nixon, Angela M. Arakaki, William J. Burnett, Kyle O. Logan, Dongfang Wang, Xiangfeng Wang, Gary N. Drews, Ramin Yadegari
      Plant Cell Mar 2015, 27 (3) 513-531; DOI: https://doi.org/10.1105/tpc.114.135657

      RNA profiling of maize kernel compartments revealed coexpression modules for each major cell type in the endosperm, including a module regulating differentiation of the basal endosperm transfer layer.

  2. Yamaji, Naoki

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  3. Yang, Jian

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu, Naoki Yamaji, Jian Feng Ma, Javier Paz-Ares, Laurent Nussaume, Shuqun Zhang, Keke Yi, Zhongchang Wu, Ping Wu
      Plant Cell Mar 2015, 27 (3) 711-723; DOI: https://doi.org/10.1105/tpc.114.135335

      A kinase complex regulates phosphate transporter trafficking in response to phosphate, inhibiting interaction with the factor regulating exit from the endoplasmic reticulum to the plasma membrane.

  4. Yang, Xi

    1. Genome-Wide Characterization of <em>cis</em>-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of <em>Opaque2</em> in Maize
      Open Access
      Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque2 in Maize
      Chaobin Li, Zhenyi Qiao, Weiwei Qi, Qian Wang, Yue Yuan, Xi Yang, Yuanping Tang, Bing Mei, Yuanda Lv, Han Zhao, Han Xiao, Rentao Song
      Plant Cell Mar 2015, 27 (3) 532-545; DOI: https://doi.org/10.1105/tpc.114.134858

      The identification of Opaque2 DNA binding targets clarified its direct target genes and revealed its broad transcriptional regulation during endosperm development.

  5. Yang, Yongqing

    1. A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      You have accessRestricted Access
      A Chaperone Function of NO CATALASE ACTIVITY1 Is Required to Maintain Catalase Activity and for Multiple Stress Responses in Arabidopsis
      Jing Li, Juntao Liu, Guoqiang Wang, Joon-Yung Cha, Guannan Li, She Chen, Zhen Li, Jinghua Guo, Caiguo Zhang, Yongqing Yang, Woe-Yeon Kim, Dae-Jin Yun, Karen S. Schumaker, Zhongzhou Chen, Yan Guo
      Plant Cell Mar 2015, 27 (3) 908-925; DOI: https://doi.org/10.1105/tpc.114.135095

      Arabidopsis protein NCA1 interacts with catalases in the cytosol and increases catalase activity through maintaining catalase folding state, which is required for stress responses.

  6. Yi, Keke

    1. The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Open Access
      The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels
      Jieyu Chen, Yifeng Wang, Fei Wang, Jian Yang, Mingxing Gao, Changying Li, Yingyao Liu, Yu Liu,