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Table of Contents

The Plant Cell: 29 (5)
May 2017

IN BRIEF

  • Chasing Scattered Genes: Identifying Specialized Metabolite Pathway Genes through Global Coexpression Analysis
    Open Access
    Chasing Scattered Genes: Identifying Specialized Metabolite Pathway Genes through Global Coexpression Analysis
    Jennifer Lockhart
    Plant Cell May 2017, 29 (5) 915; DOI: https://doi.org/10.1105/tpc.17.00303
  • The Long-Noncoding RNA ELENA1 Functions in Plant Immunity
    Open Access
    The Long-Noncoding RNA ELENA1 Functions in Plant Immunity
    Jennifer Mach
    Plant Cell May 2017, 29 (5) 916; DOI: https://doi.org/10.1105/tpc.17.00343
  • Division of Labor during Apical Hook Formation
    Open Access
    Division of Labor during Apical Hook Formation
    Kathleen L. Farquharson
    Plant Cell May 2017, 29 (5) 917-918; DOI: https://doi.org/10.1105/tpc.17.00357

LARGE-SCALE BIOLOGY ARTICLES

  • Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield
    You have accessRestricted Access
    Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield
    Rafael A. Cañas, Zhazira Yesbergenova-Cuny, Margaret Simons, Fabien Chardon, Patrick Armengaud, Isabelle Quilleré, Caroline Cukier, Yves Gibon, Anis M. Limami, Stéphane Nicolas, Lenaïg Brulé, Peter J. Lea, Costas D. Maranas, Bertrand Hirel
    Plant Cell May 2017, 29 (5) 919-943; DOI: https://doi.org/10.1105/tpc.16.00613

    A metabolomic, biochemical, fluxomic, and metabolic modeling approach developed using 19 genetically distant maize lines links leaf physiology to kernel yield.

  • A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants
    You have accessRestricted Access
    A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants
    Jennifer H. Wisecaver, Alexander T. Borowsky, Vered Tzin, Georg Jander, Daniel J. Kliebenstein, Antonis Rokas
    Plant Cell May 2017, 29 (5) 944-959; DOI: https://doi.org/10.1105/tpc.17.00009

    Global gene coexpression network analysis is a powerful approach for identifying known and novel plant-specialized metabolic pathways, irrespective of the genomic location of the constitutive genes.

  • Multi-Omics of Tomato Glandular Trichomes Reveals Distinct Features of Central Carbon Metabolism Supporting High Productivity of Specialized Metabolites
    Open Access
    Multi-Omics of Tomato Glandular Trichomes Reveals Distinct Features of Central Carbon Metabolism Supporting High Productivity of Specialized Metabolites
    Gerd U. Balcke, Stefan Bennewitz, Nick Bergau, Benedikt Athmer, Anja Henning, Petra Majovsky, José M. Jiménez-Gómez, Wolfgang Hoehenwarter, Alain Tissier
    Plant Cell May 2017, 29 (5) 960-983; DOI: https://doi.org/10.1105/tpc.17.00060

    Multi-omics and stable isotope labeling applied to tomato glandular trichomes reveal unique features for the supply of energy, reducing power and carbon in these metabolic cell factories.

  • The Molecular Dialog between Flowering Plant Reproductive Partners Defined by SNP-Informed RNA-Sequencing
    Open Access
    The Molecular Dialog between Flowering Plant Reproductive Partners Defined by SNP-Informed RNA-Sequencing
    Alexander R. Leydon, Caleb Weinreb, Elena Venable, Anke Reinders, John M. Ward, Mark A. Johnson
    Plant Cell May 2017, 29 (5) 984-1006; DOI: https://doi.org/10.1105/tpc.16.00816

    Pollen- and pistil-specific patterns of gene expression were defined during Arabidopsis reproduction using single nucleotide polymorphism-informed RNA-seq analysis.

  • Tissue-Specific Transcriptomics Reveals an Important Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
    You have accessRestricted Access
    Tissue-Specific Transcriptomics Reveals an Important Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
    Shuang-Shuang Zhang, Hongxing Yang, Lan Ding, Ze-Ting Song, Hong Ma, Fang Chang, Jian-Xiang Liu
    Plant Cell May 2017, 29 (5) 1007-1023; DOI: https://doi.org/10.1105/tpc.16.00916

    This work reveals both the tissue-specific heat responsiveness of Arabidopsis at the reproductive stage and downstream genes of the UPR regulators important in maintaining fertility upon heat stress.

RESEARCH ARTICLES

  • ELF18-INDUCED LONG-NONCODING RNA Associates with Mediator to Enhance Expression of Innate Immune Response Genes in Arabidopsis
    You have accessRestricted Access
    ELF18-INDUCED LONG-NONCODING RNA Associates with Mediator to Enhance Expression of Innate Immune Response Genes in Arabidopsis
    Jun Sung Seo, Hai-Xi Sun, Bong Soo Park, Chung-Hao Huang, Shyi-Dong Yeh, Choonkyun Jung, Nam-Hai Chua
    Plant Cell May 2017, 29 (5) 1024-1038; DOI: https://doi.org/10.1105/tpc.16.00886

    The lncRNA ELENA1 is positive regulator of plant immune response genes and regulates expression of its target gene, PR1, by promoting MED19a enrichment in the promoter.

  • Ethylene Regulates Differential Growth via BIG ARF-GEF-Dependent Post-Golgi Secretory Trafficking in Arabidopsis
    Open Access
    Ethylene Regulates Differential Growth via BIG ARF-GEF-Dependent Post-Golgi Secretory Trafficking in Arabidopsis
    Kristoffer Jonsson, Yohann Boutté, Rajesh Kumar Singh, Delphine Gendre, Rishikesh P. Bhalerao
    Plant Cell May 2017, 29 (5) 1039-1052; DOI: https://doi.org/10.1105/tpc.16.00743

    Protein trafficking machinery mediates transport of an auxin influx carrier to the plasma membrane to modulate differential growth in seedlings in response to ethylene.

  • Ethylene-Inhibited Jasmonic Acid Biosynthesis Promotes Mesocotyl/Coleoptile Elongation of Etiolated Rice Seedlings
    Open Access
    Ethylene-Inhibited Jasmonic Acid Biosynthesis Promotes Mesocotyl/Coleoptile Elongation of Etiolated Rice Seedlings
    Qing Xiong, Biao Ma, Xiang Lu, Yi-Hua Huang, Si-Jie He, Chao Yang, Cui-Cui Yin, He Zhao, Yang Zhou, Wan-Ke Zhang, Wen-Sheng Wang, Zhi-Kang Li, Shou-Yi Chen, Jin-Song Zhang
    Plant Cell May 2017, 29 (5) 1053-1072; DOI: https://doi.org/10.1105/tpc.16.00981

    Ethylene inhibits the production of jasmonic acid to facilitate the emergence of rice seedlings from the soil.

  • A Two-Step Model for de Novo Activation of <em>WUSCHEL</em> during Plant Shoot Regeneration
    You have accessRestricted Access
    A Two-Step Model for de Novo Activation of WUSCHEL during Plant Shoot Regeneration
    Tian-Qi Zhang, Heng Lian, Chuan-Miao Zhou, Lin Xu, Yuling Jiao, Jia-Wei Wang
    Plant Cell May 2017, 29 (5) 1073-1087; DOI: https://doi.org/10.1105/tpc.16.00863

    The removal of repressive histone marks in a cytokinin-rich environment primes de novo activation of WUSCHEL by B-type ARABIDOPSIS RESPONSE REGULATORs and HD-ZIP III transcription factors.

  • Rice Homeodomain Protein WOX11 Recruits a Histone Acetyltransferase Complex to Establish Programs of Cell Proliferation of Crown Root Meristem
    Open Access
    Rice Homeodomain Protein WOX11 Recruits a Histone Acetyltransferase Complex to Establish Programs of Cell Proliferation of Crown Root Meristem
    Shaoli Zhou, Wei Jiang, Fei Long, Saifeng Cheng, Wenjing Yang, Yu Zhao, Dao-Xiu Zhou
    Plant Cell May 2017, 29 (5) 1088-1104; DOI: https://doi.org/10.1105/tpc.16.00908

    Rice WOX11 promotes crown root development by interacting with a histone acetylation complex to induce permissive chromatin of gene expression.

  • KNOTTED1 Cofactors, BLH12 and BLH14, Regulate Internode Patterning and Vein Anastomosis in Maize
    Open Access
    KNOTTED1 Cofactors, BLH12 and BLH14, Regulate Internode Patterning and Vein Anastomosis in Maize
    Katsutoshi Tsuda, Maria-Jazmin Abraham-Juarez, Akiteru Maeno, Zhaobin Dong, Dale Aromdee, Robert Meeley, Toshihiko Shiroishi, Ken-ichi Nonomura, Sarah Hake
    Plant Cell May 2017, 29 (5) 1105-1118; DOI: https://doi.org/10.1105/tpc.16.00967

    Maize BLH transcription factors maintain the intercalary meristems to ensure sufficient internode elongation and prevent vein anastomosis to pattern the scattered veins in monocot stems.

  • Lateral Segregation of Photosystem I in Cyanobacterial Thylakoids
    Open Access
    Lateral Segregation of Photosystem I in Cyanobacterial Thylakoids
    Craig MacGregor-Chatwin, Melih Sener, Samuel F.H. Barnett, Andrew Hitchcock, Meghan C. Barnhart-Dailey, Karim Maghlaoui, James Barber, Jerilyn A. Timlin, Klaus Schulten, C. Neil Hunter
    Plant Cell May 2017, 29 (5) 1119-1136; DOI: https://doi.org/10.1105/tpc.17.00071

    Atomic force microscopy, optical microscopy, and structural modeling reveal extensive macromolecular arrays of cyanobacterial PSI complexes that allow some intertrimer energy migration.

  • The Mitochondrial DNA-Associated Protein SWIB5 Influences mtDNA Architecture and Homologous Recombination
    Open Access
    The Mitochondrial DNA-Associated Protein SWIB5 Influences mtDNA Architecture and Homologous Recombination
    Jonas Blomme, Olivier Van Aken, Jelle Van Leene, Teddy Jégu, Riet De Rycke, Michiel De Bruyne, Jasmien Vercruysse, Jonah Nolf, Twiggy Van Daele, Liesbeth De Milde, Mattias Vermeersch, Catherine Colas des Francs-Small, Geert De Jaeger, Moussa Benhamed, A. Harvey Millar, Dirk Inzé, Nathalie Gonzalez
    Plant Cell May 2017, 29 (5) 1137-1156; DOI: https://doi.org/10.1105/tpc.16.00899

    SWIB5 can associate with DNA in mitochondria, where its proposed role in DNA repair and architecture might influence cell proliferation during development, suggesting that these processes are linked.

  • A Proteolytic Regulator Controlling Chalcone Synthase Stability and Flavonoid Biosynthesis in Arabidopsis
    Open Access
    A Proteolytic Regulator Controlling Chalcone Synthase Stability and Flavonoid Biosynthesis in Arabidopsis
    Xuebin Zhang, Carolina Abrahan, Thomas A. Colquhoun, Chang-Jun Liu
    Plant Cell May 2017, 29 (5) 1157-1174; DOI: https://doi.org/10.1105/tpc.16.00855

    A Kelch domain-containing F-box protein mediates degradation of chalcone synthase, by which it acts as a proteolytic regulator coordinately tuning flavonoid biosynthesis.

CORRECTION

  • Open Access
    CORRECTION
    Plant Cell May 2017, 29 (5) 1175; DOI: https://doi.org/10.1105/tpc.17.00278
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The Plant Cell: 29 (5)
The Plant Cell
Vol. 29, Issue 5
May 2017
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