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Table of Contents

The Plant Cell: 31 (5)
May 2019

IN BRIEF

  • The Future is Now: Gene Expression Dynamics at Single Cell Resolution
    Open Access
    The Future is Now: Gene Expression Dynamics at Single Cell Resolution
    Rachel Shahan
    Plant Cell May 2019, 31 (5) 933-934; DOI: https://doi.org/10.1105/tpc.19.00247
  • Loss of Function, a Strategy for Adaptation in Arabidopsis
    Open Access
    Loss of Function, a Strategy for Adaptation in Arabidopsis
    Céline Caseys
    Plant Cell May 2019, 31 (5) 935; DOI: https://doi.org/10.1105/tpc.19.00195
  • Cell Wall Polymers: The Importance of Deacetylation
    Open Access
    Cell Wall Polymers: The Importance of Deacetylation
    Nancy R. Hofmann
    Plant Cell May 2019, 31 (5) 936; DOI: https://doi.org/10.1105/tpc.19.00278

LARGE-SCALE BIOLOGY ARTICLES

  • Metabolome-Scale Genome-Wide Association Studies Reveal Chemical Diversity and Genetic Control of Maize Specialized Metabolites
    You have accessRestricted Access
    Metabolome-Scale Genome-Wide Association Studies Reveal Chemical Diversity and Genetic Control of Maize Specialized Metabolites
    Shaoqun Zhou, Karl A. Kremling, Nonoy Bandillo, Annett Richter, Ying K. Zhang, Kevin R. Ahern, Alexander B. Artyukhin, Joshua X. Hui, Gordon C. Younkin, Frank C. Schroeder, Edward S. Buckler, Georg Jander
    Plant Cell May 2019, 31 (5) 937-955; DOI: https://doi.org/10.1105/tpc.18.00772

    Metabolite profiling combined with genome-wide association studies provides a resource for structural and functional assignments of the many unknown metabolites in maize seedlings.

  • A Comprehensive Map of Intron Branchpoints and Lariat RNAs in Plants
    Open Access
    A Comprehensive Map of Intron Branchpoints and Lariat RNAs in Plants
    Xiaotuo Zhang, Yong Zhang, Taiyun Wang, Ziwei Li, Jinping Cheng, Haoran Ge, Qi Tang, Kun Chen, Li Liu, Chenyu Lu, Junqiang Guo, Binglian Zheng, Yun Zheng
    Plant Cell May 2019, 31 (5) 956-973; DOI: https://doi.org/10.1105/tpc.18.00711

    Analysis of 948 RNA sequencing data sets produced a comprehensive map of intron branchpoints and lariat RNAs in Arabidopsis thaliana, tomato, rice, and maize.

  • High Temporal-Resolution Transcriptome Landscape of Early Maize Seed Development
    Open Access
    High Temporal-Resolution Transcriptome Landscape of Early Maize Seed Development
    Fei Yi, Wei Gu, Jian Chen, Ning Song, Xiang Gao, Xiangbo Zhang, Yingsi Zhou, Xuxu Ma, Weibin Song, Haiming Zhao, Eddi Esteban, Asher Pasha, Nicholas J. Provart, Jinsheng Lai
    Plant Cell May 2019, 31 (5) 974-992; DOI: https://doi.org/10.1105/tpc.18.00961

    High temporal-resolution transcriptomes uncover the genetic control of the developmental stages of double fertilization, coenocyte formation, cellularization, and differentiation in early maize seed.

RESEARCH ARTICLES

  • Dynamics of Gene Expression in Single Root Cells of <em>Arabidopsis thaliana</em>
    You have accessRestricted Access
    Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana
    Ken Jean-Baptiste, José L. McFaline-Figueroa, Cristina M. Alexandre, Michael W. Dorrity, Lauren Saunders, Kerry L. Bubb, Cole Trapnell, Stanley Fields, Christine Queitsch, Josh T. Cuperus
    Plant Cell May 2019, 31 (5) 993-1011; DOI: https://doi.org/10.1105/tpc.18.00785

    Single cell transcriptomic profiling can map developmental trajectories and assess cell-type–specific changes during heat shock at single cell resolution.

  • Adaptation and Phenotypic Diversification in Arabidopsis through Loss-of-Function Mutations in Protein-Coding Genes
    Open Access
    Adaptation and Phenotypic Diversification in Arabidopsis through Loss-of-Function Mutations in Protein-Coding Genes
    Yong-Chao Xu, Xiao-Min Niu, Xin-Xin Li, Wenrong He, Jia-Fu Chen, Yu-Pan Zou, Qiong Wu, Yong E. Zhang, Wolfgang Busch, Ya-Long Guo
    Plant Cell May 2019, 31 (5) 1012-1025; DOI: https://doi.org/10.1105/tpc.18.00791

    A large-scale study exploring how gene loss contributes to evolutionary change reveals that loss-of-function mutations contribute to the adaptation and phenotypic diversification of plants.

  • OsSHI1 Regulates Plant Architecture Through Modulating the Transcriptional Activity of IPA1 in Rice
    Open Access
    OsSHI1 Regulates Plant Architecture Through Modulating the Transcriptional Activity of IPA1 in Rice
    Erchao Duan, Yihua Wang, Xiaohui Li, Qibing Lin, Ting Zhang, Yupeng Wang, Chunlei Zhou, Huan Zhang, Ling Jiang, Jiulin Wang, Cailin Lei, Xin Zhang, Xiuping Guo, Haiyang Wang, Jianmin Wan
    Plant Cell May 2019, 31 (5) 1026-1042; DOI: https://doi.org/10.1105/tpc.19.00023

    OsSHI1 represses the DNA binding activity of IPA1 to regulate plant architecture in rice.

  • Tomato MYB21 Acts in Ovules to Mediate Jasmonate-Regulated Fertility
    Open Access
    Tomato MYB21 Acts in Ovules to Mediate Jasmonate-Regulated Fertility
    Ramona Schubert, Susanne Dobritzsch, Cornelia Gruber, Gerd Hause, Benedikt Athmer, Tom Schreiber, Sylvestre Marillonnet, Yoshihiro Okabe, Hiroshi Ezura, Ivan F. Acosta, Danuse Tarkowska, Bettina Hause
    Plant Cell May 2019, 31 (5) 1043-1062; DOI: https://doi.org/10.1105/tpc.18.00978

    Jasmonate function is necessary for proper development of ovules in tomato and is at least partially mediated by SlMYB21 as revealed by analyses of different mutants, transcriptomics, and hormone measurements.

  • Genetic Regulation of Ethylene Dosage for Cucumber Fruit Elongation
    Open Access
    Genetic Regulation of Ethylene Dosage for Cucumber Fruit Elongation
    Tongxu Xin, Zhen Zhang, Shuai Li, Shu Zhang, Qing Li, Zhong-Hua Zhang, Sanwen Huang, Xueyong Yang
    Plant Cell May 2019, 31 (5) 1063-1076; DOI: https://doi.org/10.1105/tpc.18.00957

    A RING-type E3 ligase ubiquitinates and degrades both itself and ACS2, thereby controlling the biosynthesis of ethylene, which fine-tunes cell division and fruit elongation in a dose-dependent manner.

  • Rice qGL3/OsPPKL1 Functions with the GSK3/SHAGGY-Like Kinase OsGSK3 to Modulate Brassinosteroid Signaling
    You have accessRestricted Access
    Rice qGL3/OsPPKL1 Functions with the GSK3/SHAGGY-Like Kinase OsGSK3 to Modulate Brassinosteroid Signaling
    Xiuying Gao, Jia-Qi Zhang, Xiaojun Zhang, Jun Zhou, Zhisheng Jiang, Peng Huang, Zhengbin Tang, Yongmei Bao, Jinping Cheng, Haijuan Tang, Wenhua Zhang, Hongsheng Zhang, Ji Huang
    Plant Cell May 2019, 31 (5) 1077-1093; DOI: https://doi.org/10.1105/tpc.18.00836

    Rice qGL3 negatively regulates brassinosteroid signaling by regulating the phosphorylation level and stability of OsGSK3, which modulates OsBZR1 phosphorylation status and subcellular distribution.

  • Glycome and Proteome Components of Golgi Membranes Are Common between Two Angiosperms with Distinct Cell-Wall Structures
    You have accessRestricted Access
    Glycome and Proteome Components of Golgi Membranes Are Common between Two Angiosperms with Distinct Cell-Wall Structures
    Ikenna O. Okekeogbu, Sivakumar Pattathil, Susana M. González Fernández-Niño, Uma K. Aryal, Bryan W. Penning, Jeemeng Lao, Joshua L. Heazlewood, Michael G. Hahn, Maureen C. McCann, Nicholas C. Carpita
    Plant Cell May 2019, 31 (5) 1094-1112; DOI: https://doi.org/10.1105/tpc.18.00755

    Despite the large differences in the polysaccharide constituents of the cell walls of eudicots and grasses, the glycome profiles are common to Golgi membranes from both Arabidopsis and maize.

  • Arabinosyl Deacetylase Modulates the Arabinoxylan Acetylation Profile and Secondary Wall Formation
    You have accessRestricted Access
    Arabinosyl Deacetylase Modulates the Arabinoxylan Acetylation Profile and Secondary Wall Formation
    Lanjun Zhang, Chengxu Gao, Frederic Mentink-Vigier, Lu Tang, Dongmei Zhang, Shaogan Wang, Shaoxue Cao, Zuopeng Xu, Xiangling Liu, Tuo Wang, Yihua Zhou, Baocai Zhang
    Plant Cell May 2019, 31 (5) 1113-1126; DOI: https://doi.org/10.1105/tpc.18.00894

    Rice DARX1 is a GDSL esterase that trims acetyl groups from excess acetylated arabinosyl substituents of arabinoxylan and modulates xylan conformation and secondary wall architecture.

  • The bZIP1 Transcription Factor Regulates Lipid Remodeling and Contributes to ER Stress Management in <em>Chlamydomonas reinhardtii</em>
    You have accessRestricted Access
    The bZIP1 Transcription Factor Regulates Lipid Remodeling and Contributes to ER Stress Management in Chlamydomonas reinhardtii
    Yasuyo Yamaoka, Seungjun Shin, Bae Young Choi, Hanul Kim, Sunghoon Jang, Masataka Kajikawa, Takashi Yamano, Fantao Kong, Bertrand Légeret, Hideya Fukuzawa, Yonghua Li-Beisson, Youngsook Lee
    Plant Cell May 2019, 31 (5) 1127-1140; DOI: https://doi.org/10.1105/tpc.18.00723

    The mRNA of a Chlamydomonas bZIP transcription factor is spliced by CrIRE1 under ER stress, and the resulting protein protects Chlamydomonas cells from ER stress by modulating lipid remodeling.

  • The Chromatin-Associated Protein PWO1 Interacts with Plant Nuclear Lamin-like Components to Regulate Nuclear Size
    Open Access
    The Chromatin-Associated Protein PWO1 Interacts with Plant Nuclear Lamin-like Components to Regulate Nuclear Size
    Pawel Mikulski, Mareike L. Hohenstatt, Sara Farrona, Cezary Smaczniak, Yvonne Stahl, Kalyanikrishna, Kerstin Kaufmann, Gerco Angenent, Daniel Schubert
    Plant Cell May 2019, 31 (5) 1141-1154; DOI: https://doi.org/10.1105/tpc.18.00663

    Chromatin and Polycomb-group–associated component PWO1 is functionally connected to nuclear lamina member CRWN1 via genetic and physical interaction, transcriptomic control, and subnuclear localization.

  • The Transcription Factors TCP4 and PIF3 Antagonistically Regulate Organ-Specific Light Induction of <em>SAUR</em> Genes to Modulate Cotyledon Opening during De-Etiolation in Arabidopsis
    Open Access
    The Transcription Factors TCP4 and PIF3 Antagonistically Regulate Organ-Specific Light Induction of SAUR Genes to Modulate Cotyledon Opening during De-Etiolation in Arabidopsis
    Jie Dong, Ning Sun, Jing Yang, Zhaoguo Deng, Jingqiu Lan, Genji Qin, Hang He, Xing Wang Deng, Vivian F. Irish, Haodong Chen, Ning Wei
    Plant Cell May 2019, 31 (5) 1155-1170; DOI: https://doi.org/10.1105/tpc.18.00803

    The developmental regulator TCP4 binds to and activates SAUR genes to facilitate cotyledon opening in the light, but high levels of the transcription factor PIF3 inhibit this binding in the dark.

  • Identification of Molecular Integrators Shows that Nitrogen Actively Controls the Phosphate Starvation Response in Plants
    You have accessRestricted Access
    Identification of Molecular Integrators Shows that Nitrogen Actively Controls the Phosphate Starvation Response in Plants
    Anna Medici, Wojciech Szponarski, Pierre Dangeville, Alaeddine Safi, Indeewari Madhubhashini Dissanayake, Chorpet Saenchai, Amélie Emanuel, Vicente Rubio, Benoît Lacombe, Sandrine Ruffel, Milos Tanurdzic, Hatem Rouached, Gabriel Krouk
    Plant Cell May 2019, 31 (5) 1171-1184; DOI: https://doi.org/10.1105/tpc.18.00656

    Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants.

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The Plant Cell: 31 (5)
The Plant Cell
Vol. 31, Issue 5
May 2019
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