Database of Sequences Flanking Ds Insertionsa

Chromosome 1        
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
APETALA1 (AP1) gi:16161

467

AP1 GT3676
near ACS1 locus (Y12776) gi:2505873

17770

  SGT4034
NIA1 gi:22756

841

NIA1, which encodes nitrate reductase SGT3811
   

3353

NIA1, which encodes nitrate reductase SGT3878
BAC F3F20 gi:4580365

40840

  SGT4711
BAC F3I6 gi:2749918

62310

  SGT669
BAC F3O9 gi:4887257

24460

Similarity to DEAD/DEAH box RNA helicase family SGT6697
BAC F8K4 gi:3282170

97115

Strong similarity to coatamer alpha subunit (HEPCOP) SGT2025
BAC F9K20 gi:3766106

62970

  SGT6879
   

63937

Similarity to Arabidopsis HSF30 homolog SGT4188
BAC F10A5 gi:4662609

4105

Similarity to TUBULIN BETA-1 SGT5051
   

8527

  SGT5129
   

56798

  SGT4222
BAC F10B6 gi:4757662

49830

  SGT5340
BAC F11M15 gi:4165340

30748

Similarity to Arabidopsis AINTEGUMENTA protein SGT4287
   

97670

  SGT4435
BAC F11P17 gi:2182289

2581

Putative amino acid permease SGT4754
BAC F12F1 gi:2584827

1522

  SGT4157
   

55230

  SGT3444
BAC F15K9 gi:3789706

10170

  SGT3130
BAC F17L21 gi:3228389

84063

Hypothetical protein SGT10031
BAC F19G10 gi:2098816

22410

Similarity to Bacillussubtilis SPORE COAT PROTEIN A SGT4261
   

40410

  SGT3196
BAC F19P19 gi:2341023

96690

IAA17/AXR3 auxin response gene GT3958
BAC F20D21 gi:4587641

42150

Hypothetical protein SGT1001
BAC F20N2 gi:3492855

102450

  SGT5517
BAC F20P5 gi:2182286

43080

  SGT5519
BAC F20D23 gi:5103850

11930

Hypothetical protein SGT5565
BAC F21B7 gi:2618677

29385

Similarity to protochlorophyllide reductase precusor SGT5118
BAC F22K20 gi:2477521

14742

Highly similar to at EXT1, which encodesextensin SGT3598
   

83840

Homology to peroxidases SGT3811
   

86998

  SGT4925
BAC F22O13 gi:3063438

123141

  SGT5150
BAC F23M19 gi:5091613

108

  SGT6846
   

80400

cDNA clone VBVIH04 SGT7178
BAC F24J5 gi:5724802

-160

  SGT6414
BAC T1F15 gi:3108024

20897

Similarity to mannosyl-oligosaccharide glucosidase SET1077
BAC T2K10 gi:4204173

20954

  SGT5323
BAC T4O12 gi:5019261

34774

cDNA clone 48A2T7 SGT6578
   

93230

  SGT6546
BAC T7A14 gi:4027862

~1050

  SGT1882
   

45130

EST clones gb: H36249, AA59732 and AA651219 SGT4805
BAC T8F5 gi:3335331

33970

  SGT6201
BAC T8K14 gi:4713943

37376

Hypothetical protein SGT6628
BAC T14N5 gi:3176694

10500

Similarity to Oryza sativa water stress-induced protein WSI76; EST clone gb: T13944 SGT5752
BAC T17H3 gi:5578726

12104

Hypothetical protein SGT2908
   

13362

Similarity to unknown Arabidopsis proteins SGT4632
BAC T26J12 gi:2645198

21970

Putative pectinesterase SGT6342
BAC T27G7 gi:6143825

61674

  SGT5038
YAC yUP8H12 gi:2358139

48990

and 53740

Strong similarity to Arabidopsis peroxidase ATP11a

(2 Ds copies)

SGT4342
YAC YUP8H12R gi:2494106

45510

  SGT5246
cosmid g17311 (U53502) gi:1296310

8829

  SGT1015
cosmid g8261 (U53501) gi:1297184

4020

Chromomethylase CMT1 SGT6608

 

Chromosome 2        
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
BAC F1O11 gi:4581138

27556

  SGT5698
BAC F2I9 gi:3785968

9210

Homologous to auxin transport proteins AtPIN1 and AtPIN2 SGT4961
   

9377

Homologous to auxin transport proteins AtPIN1 and AtPIN2 SGT1708
   

62687

cDNA clone 118P19T7 putative major latex protein SGT4665
   

65598

  SGT5683
   

72481

  SGT1873
   

75952

  SGT5591
   

82384

RGA1 which encodes gibberellin response GRS protein SGT842
   

88220

  SGT6341
   

89569

  SGT4602
BAC F3G5 gi:4056476

37215

Hypothetical protein SGT6369
BAC F3N11 gi:4003353

16500

  SGT5129
BAC F4I18 gi:3386593

78170

  SGT5304
BAC F4L23 gi:2583106

4635

Putative surface protein SGT6202
   

77838

Similarity to DNA repair protein (RAD57) SGT4798
   

118616

Hypothetical protein SGT1085
BAC F4P9 gi:2459406

5055

Putative tyrosine-specific transport protein, (TyrP) SGT1981
BAC F5O4 gi:4038029

67010

Putative DNA-binding protein SGT5940
BAC F6E13 gi:3212846

65450

  SGT3287
   

92865

Putative methylene tetrahydrofolate reductase SGT6036
BAC F6F22 gi:3687221

86942

  SGT1722
BACF6P23 gi:2264367

82983

NAD+ - dependent isocitrate dehydrogenase subunit 2 (IDH2) SGT1886
BAC F7F1 gi:3201608

37540

cDNA clone 224P21T7 SGT4349
   

75729

  SGT5083
BAC F8N16 gi:3927822

56370

Putative cytochrome P450 SGT4993
BAC F10A8 gi:4262221

6243

  SGT6723
   

6801

  SGT4482
   

8423

  SGT1719
   

10225

RING-H2 finger protein RHA2b SGT6304
   

12301

Putative amino acid or GABA permease SGT4598
   

13629

Putative amino acid or GABA permease SGT5510
   

14454

  SGT4485
   

15849

  SGT4756
   

18145

  SGT3976
   

30507

Putative receptor protein kinase SGT5537
   

31290

Putative receptor protein kinase SGT1712
   

32530

  SGT5363
   

35978

cDNA clone F1H8T7 SGT4113
   

73480

cDNA clone 205D13T7 SGT4369
   

77740

Hypothetical protein SGT4713
   

82135

Hypothetical protein SGT6248
   

84294

Hypothetical protein SGT6340
   

85293

Hypothetical protein SGT5112
   

85400

Hypothetical protein SGT4427
BAC F11L15 gi:5729703

2266

Pale cress gene PAC SGT6920
   

8840

Similarity to predicted Arabidopsis proteins SGT6780
BAC F13H10 gi:3894179

69303

Hypothetical protein SGT4750
BAC F13J11 gi:4726109

64702

Putative somatic embryogenesis receptor-like kinase SGT5354
BAC F13M22 gi:3236234

62145

Putative phosphoribosylaminoimidazole carboxylase SGT4915
BAC F13P17 gi:3337347

2030

Putative protein kinase SGT4868
   

24022

Hypothetical protein SGT4456
   

38984

  SGT5094
   

47880

  SGT1696
   

50230

cDNA clone 205A11T7 SGT3722
   

50840

Hypothetical protein SGT4173
BAC F16B22 gi:3341671

30381

  SGT5203
   

20300

Putative zinc finger protein SGT5021
   

?

Putative cellulase SGT4832
BAC F16M14 gi:3335356

59405

CAX1, which encodes a high affinity calcium antiporter SGT4104
BAC F16P2 gi:3980374

65744

  SGT5171
   

120117

  SGT3423
BAC F17A22 gi:3738275

18935

Hypothetical protein SGT1191
   

23323

Hypothetical protein SGT5654
   

37790

cDNA clones 97E18T7 210L3T7 SGT4101
   

93725

Hypothetical protein SGT2765
BAC F17K2 gi:2979540

51782

  SGT4970
BAC F19I3 gi:3033373

2168

Hypothetical protein SGT4530
   

2180

Hypothetical protein SGT4533
   

5500

Putative berberine bridge enzyme SGT3441
   

27486

  SGT5238
   

29060

  SGT5682
   

35625

  SGT1706
   

57600

Hypothetical protein SGT2837
BAC F20M17 gi:4887740

26723

  SGT6426
   

89198

Putative indole-3-acetate beta-glucosyltransferase SGT5139
BAC F23H14 gi:5870284   Weak similarity to yeast membrane protein PTM1 precursor SGT5414
BAC F24H14 gi:4217996

79440

Putative protein kinase SGT6568
BAC F26C24 gi:3252804

30960

  SGT2966
BAC F26H11 gi:4803919

75900

  SGT6602
BAC F27D4 gi:4115370

53524

Putative limonene cyclase SGT4004
BAC F28I8 gi:4544405

24560

Hypothetical protein SET1022
BAC T06D20 gi:1871173

66890

  SGT4690
BAC T08I13 gi:2275194

3840

Similarity to Oryza sativa water stress-induced protein WSI76, cDNA 107N1T7 SGT4041
BAC T1D16 gi:3075383

21826

G protein alpha subunit 1, (GPA1) SGT5667
BAC T2G17 gi:4580454

51825

  SGT5951
BAC T3A4 gi:3831437

27730

  SGT4076
BAC T3F17 gi:3702315

10970

  SGT4698
BAC T3K9 gi:3402695

24900

Hypothetical protein SGT4705
BAC T4C15 gi:3668073

6545

mRNA for LEA D113 type2 protein SGT3064
   

32830

Hypothetical protein SGT3118
   

85650

Hypothetical protein SGT3502
BAC T6P5 gi:4006815

13875

Putative translation initiation factor eIF-2B, alpha subunit SGT5299
BAC T7F6 gi:3928074

78790

  SGT5301
BAC T8O11 gi:4220468

11730

Hypothetical protein SGT6348
   

15733

  SGT5754
   

17350

Hypothetical protein SGT6484
   

34657

Similarity to cleavage and polyadenylation specifity factor SGT4559
   

38445

Similarity to cleavage and polyadenylation specifity factor SGT1922
   

77403

Putative beta-1,3-glucanase SGT85
BAC T9D9 gi:3150395

38847

Homologous to Arabidopsis anter-specific proline-rich protein (APG) SET1059
   

40700

  SGT22
   

57890

Hypothetical protein SGT5163
BAC T9J22 gi:2739359

5450

Putative peroxisome assembly protein, PER8 SGT3777
BAC T9J23 gi:4249393

43740

Weak similarity to Zea mays CRP1 SGT6526
   

53114

cDNA clone 92E15T7 SGT4163
   

72418

Hypothetical protein SGT4071
BAC T10F5 gi:4558656

40616

Putative malate oxidoreductase (NAD) SGT6246
   

40770

Putative malate oxidoreductase (NAD) SGT6035
BAC T11A7 gi:2335089

42880

cDNA clone 89I22T7 & 120H1T7 SGT4430
BAC T13E11 gi:4309747

30953

Putative transposase SGT4730
   

30960

Putative transposase SGT5725
   

30986

Putative transposase SGT4985
BAC T13L16 gi:2708736

13141

  GT3746
   

66610

similar to Z. mays physical impedence protein IIG2 SGT6531
BAC T13P21 gi:4263813

23941

cDNA clone 82C1T7; 166F9T7; 204I18T7. SGT4080
BAC T14G11 gi:2342717

28407

  SGT5112
   

49860

Hypothetical protein SGT3669
BAC T14P1 gi:4895233

24888

  SGT6197
BAC T16B12 gi:3746057

30036

Hypothetical protein SGT4444
BAC T16F16 gi:3894156

1433

Putative protein kinase SGT5281
   

11280

Hypothetical protein SGT5248
   

11530

Hypothetical protein SGT4801
   

15545

  SGT4468
   

19910

  SGT5940
   

34600

similar to phloem-specific lectin SGT6639
   

35547

Similarity to phloem-specific lectin SGT3257
   

37130

  SGT4335
BAC T17M13 gi:3461810

15240

  SGT7149
   

21944

Hypothetical protein SGT5362
BAC T18E12 gi:3548797

32830

  SGT3557
BAC T20F6 gi:2947056

25790

Putative membrane protein SGT4796
BAC T20F21 gi:4263774

56639

cDNA clones 178H8T7 and 178H9T7; putative glucosyltransferase SGT4425
BAC T20K9 gi:3445196

32782

  GT4730
   

54580

  SGT1958
BAC T24P15 gi:2673901

41310

Hypothetical protein SGT4698
BAC T26B15 gi:3298532

71915

Hypothetical protein SGT4091
BAC T26I20 gi:3650026

15170

cDNA clone VBVHF04 SGT4036
   

15174

cDNA clone VBVHF04 SGT10049
   

73425

Similarity to auxin-responsive protein GH3 SGT4174
   

74340

Similarity to auxin-responsive protein GH3 SGT736
BAC T26J13 gi:3241939

14984

Hypothetical protein SGT5133
BAC T29F13 gi:3132469

5918

FAH1 which encodes fatty acid hydroxylase SGT4272
   

13215

Putative protein phosphatase 2C SGT4978
   

28627

ATHB-14, which encodes homeobox protein GT4606
   

34490

  SGT4074
   

37250

Similarity to proline-rich protein SGT4295
   

37905

Similarity to proline-rich protein SGT4231
   

37910

Similarity to proline-rich protein SGT4458
   

38377

Hypothetical protein SGT3183
   

38710

Hypothetical protein SGT4500
   

38715

Hypothetical protein SGT4450
   

42431

  SGT2215
   

47830

Hypothetical protein SGT4123
   

51434

Hypothetical protein SGT4185
   

51453

Hypothetical protein SGT4529
BAC T29E15 gi:3738313

38693

Putative polygalacturonase SGT2768
BAC T30D6 gi:4309719

70880

  SGT5787
BAC T30B22 gi:2529657

71770

Putative MYB-related transcription factor (protein P) SGT6254
BAC T31E10 gi:3327922

639

Multidrug resistance protein 2 (AtMRP2) SGT3742
   

32650

cDNA clone 213K12T7; putative pyruvate dehydrogenase complex E1 beta subunit SGT4246
   

66576

Putative cytochrome p450 protein SGT5943
BAC T32F12 gi:3608126

68929

  SGT3709
P1 MFL8 gi:4531433

25020

cDNA clone VBVXG05; similarity to pectinesterase SGT5109
   

42941

  SGT5306

 

Chromosome 3        
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
ATEM1 locus (AF049236) gi:3068702

52228

Hypothetical protein SGT3594
BAC F24K9 gi:6006873

14718

  SGT6629
   

14239

Similarity to unknown Arabidopsis proteins SGT6466
BAC MZB10 gi:5923662

42820

  SGT6535
BAC T12H1 AC009177   cDNA 96K12T7; similarity to microsomal signal peptidase SGT6261
P1 MDC16 gi:3869068

31381

  SGT483
P1 MFE16 gi:5041964

50680

Putative phosphate permease SGT4179
P1 MJK13 gi:4159707

1900

  SGT5726
P1 MLM24 gi:3241922

83170

  SGT10080
P1 MLN21 gi:4159709

36170

  SGT6236
   

46760

cDNA clone E8H8T7; Similarity to Zea mays leucine-rich repeat transmembrane protein kinase 1 SGT4523
P1 MOA2 gi:5041970

50630

putative reverse transcriptase SGT6544
P1 MRC8 gi:3985952

20800

Putative beta-glucosidase SGT5104
   

58581

Hypothetical protein SGT1532
P1 MTC11 gi:4519197

21350

cDNA clone 2G8XP, cytochrome P450 monooxygenase SGT6641
P1 MVI11 gi:5832740

5818

Similarity to putative Arabidopsis receptor protein kinases SGT5399
P1 MXL8 gi:4220644

648

  SGT6533
   

20740

Similarity to unknown Arabidopsis proteins SGT6441
TAC K14A17 gi:4757392

64010

cDNA 95L21XP SGT5680
TAC K15N2 gi:5541653

45430

cDNA 32C10TT SGT6577
   

60720

  SGT6914

 

Chromosome 4        
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
AP2 contig fr. No. 1 (Z99707) gi:4376087

12570

cDNA clone E3E8T7 SGT1954
   

37476

similarity to Arabidopsis protein kinase TMK1 SGT6804
AP2 contig fr. No. 2 (Z99708) gi:4006885

25420

Geranylgeranyl pyrophosphate synthase mRNA SGT5046
   

26907

cDNA clone 31B1T7; ubiquitin-protein ligase-like protein SGT6415
   

178690

ROTUNDIFOLIA3 (ROT3) SGT6410
   

188112

  SGT6399
ESSA I FCA contig fr. No.1 (Z97336) gi:2244788

99150

Hypothetical protein SGT3911
ESSA I FCA contig fr. No.2 (Z97337) gi:5302774

39822

  SET572
   

65000

Similarity to probable RNA helicase SUV3 SGT3904
ESSA I FCA contig fr. No.3 (Z97338) gi:5280990

117140

cDNA 98D6T7; strong similarity to cytochrome P450 SGT4233
ESSA I FCA contig fr. No.5 (Z97340) gi:5302781

79690

mRNA for receiver-like protein 5 SGT4387
ESSA I FCA contig fr. No.6 (Z97341) gi:5302794

16530

  SGT6783
ESSA I FCA contig fr. No.7 (Z97342) gi:2245031

150797

Allergen homolog SGT5770
ESSA I FCA contig fr. No.8 (Z97343) gi:2245073

122040

  SGT3743
BAC IG002N01 gi:2191126

41275

Hypothetical protein SGT2247
   

53300

Hypothetical protein SGT6752
   

80250

cDNAs T46771; N97218; T41776; T42436; H37214 SGT4784
BAC F4C21 gi:3299824

18492

Putative C-type U1 snRNP SGT5671
   

25507

Putative alcohol dehydrogenase SGT4293
BAC F5I10 gi:2252823

4870

Hthetical protein SET701
   

22100

  SGT5102
   

24770

Transmembrane protein SGT3508
   

25581

Transmembrane protein SGT1653
   

26250

Transmembrane protein SGT4599
   

33565

  SET635
   

62525

Receptor-like protein kinase SGT4413
   

63180

Receptor-like protein kinase SGT4409
   

63385

Receptor-like protein kinase SGT2763
   

63612

Receptor-like protein kinase SGT4745
   

63696

  SGT6370
   

66370

  SGT6655
   

68063

Weak similarity to receptor protein kinase, SGT2381
   

68630

Weak similarity to receptor protein kinase; SGT1739
   

77184

cDNA clone TAY066 SGT5156
   

77200

cDNA clone TAY066 SGT5837
   

78685

cDNA clone TAY066 SGT1890
   

83410

Hypothetical protein SGT1047
   

97040

Hypothetical protein SGT5448
   

97200

Hypothetical protein SGT1516
BAC F6G17 gi:4468801

24546

Smilarity to unknown Arabidopsis proteins SET1036
   

32035

Similarity to soybean auxin-responsive gene (GH3) product SGT5949
   

69135

Similarity to beta-ketoadipate enol-lactone hydrolase, Acinetobacter sp, - contains ESTs gb: T45314, AA586098 SGT6839
BAC F6I18 gi:2980757

20750

Similarity to probable yeast membrane protein YBL004w SGT2102
BAC F6N15 gi:3193311

6500

  SGT469
   

6980

  SGT5243
   

7439

cDNA clone G11F3T7 SGT4353
   

7577

cDNA clone G11F3T7 SGT1048
   

8038

Unknown protein coded by cDNA clone W43412 SGT4405
   

15465

Hypothetical protein SGT6152
   

17560

Hypothetical protein SGT4224
   

20250

Hypothetical protein SGT5545
   

23310

  SGT4263
   

22708

  SGT66
   

27645

transfer RNA-Lys gene SET673
   

31005

40S ribosomal protein S13 SGT6422
   

48235

  SGT270
   

48860

  SGT4133
   

50920

  SGT5040
   

51430

Similarity to Scarecrow, cDNA VBVVB08 SGT3425
   

53065

Similarity to Scarecrow, SGT534
   

55414

  SGT5193
   

63903

Similarity to Medicago sativa cold-regulated gene (corC) SGT5885
   

64205

Similarity to Medicago sativa cold-regulated gene (corC), cDNA R65504 SGT4302
   

66415

  SET1023
   

72687

  SGT3404
   

76950

Similarity to Arabidopsis AT-hook protein 1 SGT6582
   

79245

  SGT4110
   

89250

Similarity to the subtilase family of serine proteases SGT507
   

91393

cDNA N96291 SGT4172
   

91527

cDNA N96291 SGT2152
BAC F6N23 gi:3047100

530

Hypothetical protein SGT4094
   

2020

  SGT1862
   

4235

  SGT10037
   

8365

  SGT5411
   

15210

  SGT5654
   

36450

Hypothetical protein SET655
   

55460

  SGT5147
   

77090

Strong similarity to phosphoribosylanthranilate transferase SGT4305
   

85017

  SGT5772
   

90653

Anthocyaninless2 (ANL2) SGT7057
BAC F7J7 gi:4584387

66326

cDNA clone 36B3T7 SGT5667
   

70773

Similarity to Escherichia coli UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase SGT4982
BAC F8B4 gi:4049332

60308

  SGT5144
BAC F8M12 gi:3513725

27760

  SGT4109
BAC F10M6 gi:2864607

64125

Similarity to Phaseolus vulgaris HEAT SHOCK 70 KD protein; contains EST gb: 394917 SGT1005
   

73482

Similarity to unknown Arabidopsis proteins SGT4009
BAC F11O4 gi:3695372

11178

  SGT2731
   

31360

Similarity to reverse transcriptase-like proteins SGT4686
   

69560

  SGT5229
BAC F16A16 gi:4218109

37760

Similarity to phytochrome-associated protein 3 SGT6680
BAC F16G20 gi:3451055

68100

Similarity to unknown Arabidopsis proteins SGT840
BAC F17I5 gi:3297806

62042

EST clones gb: AA712573, H36510 SGT4968
BAC F17L22 gi:4455262

91094

Meristem L1-specific homeobox protein (ATML1) SGT4886
BAC F19F18 gi:4468976

65560

  SGT1570
BAC F21C20 gi:5262205

22412

  SGT6576
   

65597

Similarity to Eschscholzia californica reticuline oxidase SGT5837
BAC F21P8 gi:3021263

68070

Similarity to Brassica oleracea serine/threonine kinase SGT6322
BAC F22I13 gi:4539331

47630

Putative pollen allergen GT2577
BAC F23E13 gi:2961370

20112

Hypothetical protein SGT5083
   

50500

Putative glycine-rich cell wall protein SGT4381
BAC F13M23 gi:4455229

62490

  SGT5239
BAC F26P21 gi:3688169

64620

Pyruvate decarboxylase-1 (PDC1) SGT4861
   

73630

  SGT5476
BAC F28A23 gi:3763944

60570

Hypothetical protein SGT4142
BAC F28J12 gi:2832639

84930

Lipase-like protein SGT3532
BAC F28M20 gi:3281847

29136

  SGT1446
BAC M3E9 gi:5708090

15710

  SGT5380
BAC M4I22 gi:3269280

25860

  SGT3855
BAC T4I9 gi:3242970

12435

Predicted protein SGT6479
BAC T4L20 gi:3096911

101680

  SGT2639
BAC T5C23 gi:4539448

61690

H+-transporting ATPase-like protein SGT5190
BAC T5J8 gi:2815519

32032

  SGT1244
BAC T6L9 gi:4732170     SGT5071
BAC T8O5 gi:2894557

73995

Peroxidase ATP1a SGT751
BAC T9A14 gi:4490324

50353

PRP8 which encodes putative splicing factor SGT5125
BAC T10I14 gi:2832667

18331

Hypothetical protein SGT5311
   

26410

  SGT2414
   

55501

  SGT5315
BAC T10M13 gi:2104523

67400

CTP synthase, UTP ammonia ligase SGT5822
BAC T13J8 gi:4455348

30735

  SGT6459
BAC T14P8 gi:3193282

88040

Similar to bacterial and fungi pectinesterases SET1013
BAC T15B16 gi:3859590

21650

Similarity to unknown Arabidopsis proteins SGT4158
   

25860

Similarity to wild oat DNA-binding protein ABF2 SET1103
   

48262

  SGT6092
   

62880

100 bp upstream mRNA for an ABC1-like gene SGT5464
   

76613

cDNA 159P8T7; Similarity to cysteine proteases SGT5544
   

85180

Hypothetical protein SGT6134
BAC T15N24 gi:4938493

80360

Similarity to probable Arabidipsis kinesin SGT6731
BAC T19F6 gi:2262097

2400

Similarity to Thaumatococcus daniellii THAUMATIN I SGT5141
BAC T19P19 gi:5748500

3853

mRNA for gamma-glutamyl transpeptidase SGT6375
   

38907

Similarity to Rhodobacter sphaeroides photosynthesis response regulatory protein (PRR) SGT2157
BAC T22A6 gi:5051759

15813

  SGT6657
BAC T24H24 gi:3293581

60158

Similar to pyrophosphate-fructose 6-phosphate 1-phosphotransferase SGT458
BAC T25K17 gi:4539415

14555

  SGT6362
   

64819

Similarity to subtilisin protease SGT6731
BAC T29A15 gi:4469002

71040

Similarity to yeast intramitochondrial sorting protein (MSP1) SGT6374
BAC TM018A10 gi:2252848

6754

Similarity to receptor kinase SGT6377
   

7569

Similarity to receptor kinase SGT4883
   

9770

  SGT4248
   

15150

  SGT3556
   

16674

  SGT3171
   

19578

  SGT5787
   

50270

  SGT5230
   

60650

Similarity to soybean auxin-induced protein (X15), cDNA T43845 SGT2079
   

65480

Similarity to the MYC family of transcription factors SGT4072
   

78486

Hypothetical protein SGT6098
P1 M7J2 gi:5596409

4948

Contains EST gb:T45048 SGT5154
YAC CIC5B11 gi:3150006

28997

  SGT1621
   

29615

  SGT5300
   

29517

  SGT5467

 

Chromosome 5        
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
BAC F6H11 gi:2827698

11330

Hypothetical protein SGT6688
BAC T1N24 gi:4809270

18356

  SGT5071
BAC T12B11 gi:4589446

4970

Hypothetical protein SGT5109
BAC T20O7 gi:4757416

4216

  SGT7049
P1 MBB18 gi:2264303

32863

  SGT5183
P1 MCA23 gi:3449327

22448

160bp upstream of farnesyl diphosphate synthase FPS1 gene SGT5421
P1 MCK7 gi:3869067

55494

  SGT5705
P1 MDC12 gi:2618600

13672

Hypothetical protein SGT96
P1 MDN11 gi:3510340

18340

  SGT1924
P1 MED24 gi:2264307

42067

  SGT617
P1 MFB13 gi:2760169

16111

  SGT1587
P1 MGI19 gi:2564046

8526

Similarity to Solanum tuberosum alpha-glucosidase SGT5691
   

9639

Similarity to Solanum tuberosum alpha-glucosidase SGT754
P1 MHF15 gi:2351065

16120

  SGT5901
   

16132

  SGT5501
   

38489

Similarity to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase SGT5015
P1 MHK7 gi:2924654

53859

Similarity to Dictyostelium myosin heavy chain kinase B SGT3490
P1 MJB21 gi:2564047

48470

  SGT5101
   

48940

  SGT4564
   

64790

  SGT4641
P1 MJB24 gi:3869072

35061

  SGT1647
P1 MJC20 gi:3510343

81178

  SGT2029
P1 MMI9 gi:3869074

39607

cDNA clone 178E21XP SGT10154
P1 MMN10 gi:3241923

5460

  SGT959
   

65500

Similarity to unknown Arabidopsis proteins SGT7061
P1 MNA5 gi:2924729

29877

  SGT4802
P1 MNB8 gi:3702734

37600

  SGT5882
P1 MNC6 gi:3241924

3390

  SGT5496
P1 MNC17 gi:3449331

29667

Similarity to unknown Arabidopsis proteins SGT3726
P1 MOJ9 gi:2828182

5514

  SGT10163
P1 MOK16 gi:2264312

8093

  SGT1875
   

8340

cDNA clone 248K21T7 SGT6329
P1 MOP10 gi:2264313

51719

Similarity to ethylene-forming enzyme and flavonol synthase SGT473
P1 MQJ16 gi:3046852

36181

Hypothetical protein SGT4401
P1 MRA19 gi:3046853

82480

Similarity to brassinosteroid insensitive 1, cDNA 123I16T7 SGT5600
   

83130

  SGT6805
P1 MRH10 gi:2351068

50955

  SGT4835
P1 MRI1 gi:3702736

3593

cDNA F3A10T7; 251K2T7; Similar to Arabidopsis CONSTANS SGT4250
P1 MTH12 gi:2351070

34036

  SGT5621
P1 MTH16 gi:3985955

31921

Similarity to unknown Arabidopsis protein SGT5273
P1 MTI20 gi:3128143

52800

Similarity to unknown Arabidopsis protein SGT7011
P1 MUA2 gi:2924732

67430

3'-end of putative transcription factor, (MYB36) mRNA SGT4370
P1 MUF9 gi:2924733

12438

cDNA clone 275D8T7 SGT40
P1 MUG13 gi:2264317

52462

Similarity to putative pectinesterases SGT1758
P1 MUK11 gi:2618605

76422

  SGT4948
P1 MUP24 gi:2264318

7761

Similarity to unknown Arabidopsis proteins SGT3590
   

27135

  SGT15
P1 MVP7 gi:4589443

36420

  SGT6268
P1 MXC9 gi:2696018

69502

  SGT4822
P1 MXC20 gi:2656031

11289

  SGT4278
P1 MXE10 gi:2924734

2052

  SGT10058
P1 MXF12 gi:3449333

774

Similar to Daucus carota somatic embryogenesis receptor-like kinase SGT4090
P1 MYH19 gi:2760173

51001

Similarity to unknown Arabidopsis proteins SGT1899
P1 MZA15 gi:3449323

13480

  SGT7154
TAC K2A18 gi:2924651

39612

Similarity to C3HC4-type zinc finger proteins SGT1606
   

59860

Putative alpha-mannosidase SGT5479
   

61679

Similarity to RING zinc finger protein? SGT1547
TAC K2I5 gi:4589419

45258

  SGT6725
TAC K7J8 gi:4220633

6070

cDNA 40D11T7, homology to Aspergillus niger xylosidase SGT5561
TAC K9L2 gi:2924652

21805

  SGT4750
TAC K14B20 gi:3702723

36505

  SGT4143
TAC K15N18 gi:3241916

5636

cDNA clones 64C8T7 and 181I8T7 SGT4048
TAC K17N15 gi:3702724

42370

  SGT4617
TAC K18G13 gi:3128134

25432

NADPH-protochlorophyllide oxidoreductase SGT4757
TAC K18J17 gi:3510336

37932

  SGT1436
TAC K21H1 gi:3985931

9966

cDNA clones FAFC74-1; E2G4T7 SGT4223
TAC K21L13 gi:4757395

6338

  SGT5145
TAC K23F3 gi:5541655

28000

  SGT5269
Y08951 gi:1632775

2466

t5r gene pyrroline carboxylate reductase SGT5089

 

Unknown Chromosome      
Map Location b GenBank

GI

Number c

Position d Disrupted Gene / Predicted Gene e Line Number f
BAC T19D16 gi:1931636

63787

  SGT4669
clone F26K10 gi:4775266     SGT5215
clone T16I18 gi:4884022

4860

  SGT5388
BAC End F8L1 gi:5285502

+70

Pyruvate dehydrogenase kinase (PDK) AF039406 SGT6269
BAC end F14N10 gi:5288855

+200

  SGT6229
BAC End F18N10 gi:2998872

144

Putative retrotransposon polyprotein SGT6242
BAC End F19O21 gi:2091505

300

cDNA clone 200L21T7 SGT4438
BAC End F20F7 gi:2508265

204

cDNA clone G5B6T7 SGT6273
BAC End F22L4 gi:2092071

297

  SGT4193
BAC End F24P4 gi:2508677

315

  SGT576
BAC End F25D1 gi:3704475

-100

Similarity to receptor protein kinases SGT4624
   

59

Similarity to receptor protein kinases SGT2692
BAC End F28K9 gi:2509130   cDNA clone F1C8T7 SGT570
BAC End T3D21 gi:5290242

286

Similar to unknown Arabidopsis proteins SGT5443
BAC End T6L6 gi:2512018   Similarity to Schizosaccharomyces pombe 26S Proteasome regulatory subunit MTS4 SGT4227
BAC End T10C13 gi:2515482

-500

  SGT5168
BAC end T12C16 gi:5295038

363

  SGT6499
BAC End T18H19 gi:2514711     SGT1742
BAC End T20N16 gi:2628977     SGT4487
        SET1003
        SGT5114
BAC End T21N16 gi:2629222

224

Similar to gibberellin response regulatory proteins GRS, GAI SGT625
BAC End T21O6 gi:2091124

382

  SGT5402
BAC End T22C4 gi:2665948

150

  SGT6668
BAC End T26H7 gi:2773437

10

Weak similarity to UDP-glucose glucosyltransferase SGT6549
BAC End T27E7 gi:2513030   Putative reverse transcriptase SGT5275
Z84202 gi:1785619

1099

  SGT927
  gi:1495250

1218

mRNA for heat-shock protein Z70314 SGT6215
  gi:2748667

184

cDNA clone G8H2T7 N96363; NADPH-protochlorophyllide oxidoreductase SGT29
  gi:2047699

117

cDNA clone 129H2XP AA394488 SGT35
  gi:2748695

180

cDNA clone G9H4T7 N95864 SGT49
  gi:1565787

-100

cDNA clone 91F18T7 AA067454 SGT264
  gi:1268171

-20

cDNA clone F1C8T7 N96404 SGT570
  gi:936229

200

cDNA clone 155I4T7 T88391 SGT820
  gi:931163   cDNA clone 51E11T7 T14219 SGT1059
  gi:2722894

159

cDNA clone 222F13T7 AA712977 SGT1191
  gi:2747472

210

cDNA clone 11A10TT AA728515 SGT1266
  gi:914434   cDNA clone 92N14T7 T21489 SGT1328
  gi:1269065

189

cDNA clone G8A12T7 N96292 SGT1428
  gi:1053360

201

cDNA clones 195E17T7 H76109, 195F10T7, 195G12T7, 123N17T7 SGT1641
  gi:1216041   cDNA clone TAP0245 F20067; similarity to ribosomal protein S8 SGT1665
  gi:1033247   cDNA clone GBGF589 F15267 SGT1745
  gi:906772

259

cDNA clones 179G19T7 H37273, 91J3T7, 109F15T7 SGT1851
  gi:1932866

-50

cDNA clone OS076 U74134; Similarity to putative Arabidopsis Cys3His zinc finger protein gi:1871192 SGT2374
  gi:1216885   cDNA clone 224E17T7 N65259 SGT2510
  gi:2749658

400

cDNA clone 184E18XP AA651416 SGT2656
  gi:2763259

363

cDNA clone 135G19T7 T46577; Similarity to cysteine proteinases SGT4015
  gi:2758676

158

80

cDNA clone 118N10T7 T43877; Similarity to UDP-glucose glucosyltransferase SGT4057

SGT6227

  gi:557618

60

cDNA clone VBVMC05 Z38049; Smilarity to aminoacylase-1 SGT4121
  gi:2764299

350

cDNA clone 169G18T7 R65313; Similarity to thioredoxin SGT4282
  gi:2048862

256

cDNA clone 95L21XP AA395637 SGT4331
  gi:3450594   cDNA clone 97O14XP AI100633 SGT4355
  gi:2763934

264

cDNA clone 161E1T7 R29793; Similarity to SCARECROW SGT4567
  gi:2763288   cDNA clone 137H16T7 T46609; Similarity to Glycine max auxin down-regulated ADR11-2 SGT4743
  gi:2413158

65

cDNA clone 222A10T7 AA597735 SGT4785
  gi:1158355

294

cDNA clone 207N9T7 N37230; Similarity to Chlorophyll a/b-binding protein CP29 SGT4826
  gi:1268902

200

cDNA clone G4D1T7 N96767; Similarity to GRS, GAI, SCARECROW SGT5010
  gi:2048555

17

cDNA clone 122F8XP AA395344; Similarity to dynein light chain 1 SGT10032
  gi:992703

660

UBC7 encoding ubiquitin conjugating enzyme E2 U33757 SGT45
  gi:992920

773

mRNA for LEA protein in group 5 D64139 SGT5178
  gi:3449553

330

cDNA clone 125G4XP AI099814 SGT5416
  gi:974740   cDNA clone GBGF106 F15119 SGT6569
  gi:1216636

-30

cDNA clone 224K3T7 N65010; similar to unknown protein SGT6590
  gi:1269573   cDNA clone 246F17T7 N97206; Similarity to polygalacturonases SGT6366
  gi:899160

379

cDNA clone TAP0050 F14351 SGT6331
  gi:3098611

54

Senescence associated gene (SAG20) mRNA AF053064 SGT3607

 

aThe table was updated on August 16, 1999. IMPORTANT NOTICE: All accession numbers have been substituted by GI numbers as of December 30, 1999. This action was necessiated by recent changes in the nucleotide numbering for chromosome 2 sequences displayed using the GenBank accession numbers in the older version of the table. According to GenBank, the sequence and even the name of the entry within any accession number can be changed at any time making it difficult to identify the required sequence file. Apparently GI entries are more stable than sequences labelled with accession numbers. Therefore, this modification is intended to protect the positional data in the table from being affected by future editing of the sequences specified by accession numbers.

bInsertions into previously sequenced regions (including partially sequenced) are shown.

cOriginal sequences can be extracted from GenBank by using the indicated hyperlink and/or GI number.

dNumbers indicate the insertion site according to the corresponding base number in the original GenBank sequence.

eIndicates the gene/cDNA (including predicted genes) that has been disrupted by insertion of a Ds element possibly affecting its translation (i.e., insertions occurring between 200 bases upstream of the ATG codon and the poly(A)+ site) or that shows the greatest similarity to a known protein sequence.

fEach number represents a single Ds insertion line.