RT Journal Article SR Electronic T1 Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis JF The Plant Cell JO Plant Cell FD American Society of Plant Biologists SP 2089 OP 2103 DO 10.1105/tpc.104.022236 VO 16 IS 8 A1 Lurin, Claire A1 Andrés, Charles A1 Aubourg, Sébastien A1 Bellaoui, Mohammed A1 Bitton, Frédérique A1 Bruyère, Clémence A1 Caboche, Michel A1 Debast, Cédrig A1 Gualberto, José A1 Hoffmann, Beate A1 Lecharny, Alain A1 Le Ret, Monique A1 Martin-Magniette, Marie-Laure A1 Mireau, Hakim A1 Peeters, Nemo A1 Renou, Jean-Pierre A1 Szurek, Boris A1 Taconnat, Ludivine A1 Small, Ian YR 2004 UL http://www.plantcell.org/content/16/8/2089.abstract AB The complete sequence of the Arabidopsis thaliana genome revealed thousands of previously unsuspected genes, many of which cannot be ascribed even putative functions. One of the largest and most enigmatic gene families discovered in this way is characterized by tandem arrays of pentatricopeptide repeats (PPRs). We describe a detailed bioinformatic analysis of 441 members of the Arabidopsis PPR family plus genomic and genetic data on the expression (microarray data), localization (green fluorescent protein and red fluorescent protein fusions), and general function (insertion mutants and RNA binding assays) of many family members. The basic picture that arises from these studies is that PPR proteins play constitutive, often essential roles in mitochondria and chloroplasts, probably via binding to organellar transcripts. These results confirm, but massively extend, the very sparse observations previously obtained from detailed characterization of individual mutants in other organisms.