Table 1.

Homologies of Sequences of AFLP Fragments to Sequences in the Databases

AFLP
Fragment
GenBank
Accession
Number
Length
(bp)
Induced/
Represseda
Inhibited
by DPI?
HomologybBLAST
Scorec
    1AF211541151+NoEREBP-4 homolog from Arabidopsis (Z97343)8e-15
    4AF211544141+NoNL27 from potato (AJ009720)3e-9
  10AF211550144+NoPutative protein predicted from genome sequence of Arabidopsis (AL022140)0.007
  11AF211551107+NoS domain receptor-like protein kinase from maize (AJ010166)0.001
  31AF211566154+NoCalcium binding protein CAST from potato (L02830)6e-19
  36AF211570  77+NoPutative chloroplast nucleoid DNA binding protein from Arabidopsis (AC006580)2e-4
  41AF211574152NoNonclathrin coat protein gamma-like protein from Arabidopsis (AL023094)2e-19
  44AF211577  91+No13-Lipoxygenase from potato (X96406)2e-8
  47AF211580121+NoACC synthase from tobacco (AJ005002)9e-12
  52AF211584154+NoAnthocyanin-3-glucoside rhamnosyltransferase from Arabidopsis (AC006592)6e-7
  57AF211589208+NoCalmodulin-like protein from Arabidopsis (AL049862)6e-14
  64AF211594  86+NoPeroxidase 3 from Scutellaria baicalensis (AB024439)9e-6
  76AF211605133+NoUnknown protein predicted from genome sequence of Arabidopsis (AC005623)1e-8
  84AF211611154+NoHypothetical protein predicted from genome sequence of Arabidopsis
    (AL050352)
7e-4
  85AF211612168+NoHypothetical protein predicted from genome sequence of Arabidopsis
    (AC005397)
3e-4
  97AF211622129YesMAP kinase–like protein from Selaginella lepidophylla (U96716)2e-6
101AF211626  71+NoSimilar to synaptobrevin-related protein from Arabidopsis (Z97339)8e-4
102AF211627125+NoPutative mitochondrial protein predicted from genome sequence of
    Arabidopsis (AC006418)
2e-12
105AF211630  68YesChloroplast genome DNA from tobacco (Z00044)2e-19c
110AF211634  79YesChloroplast genome DNA from tobacco (Z00044)3e-37c
111AF211635117+NoDREB1A from Arabidopsis (AB007787)1e-14
126AF211645141+NoProtein similar to WRKY transcription factors from Arabidopsis (AC011809)3e-12
139AF211656147+NoHypothetical protein predicted from genome sequence of Arabidopsis
    (AC005662)
2e-11
143AF211660144+NoPhosphate-induced phi-1 protein from tobacco (AB018441)5e-24
146AF211662108+NoPutative protein predicted from genome sequence of Arabidopsis (AL078470)8e-5
150AF211666176+NoSerine/threonine protein kinase isolog from Arabidopsis (U95973)6e-10
157AF211672146+NoSimilarity to transcription factor TINY from Arabidopsis (AC003979)5e-6
164AF211679103+NoExpressed sequence tag from Arabidopsis (AC006577)0.002
175AF211690118+NoHexose transporter protein from tomato (AJ010942)5e-7
215AF211724  89+NoFlavanol 3-sulfotransferase from Flaveria bidentis (U10275)0.002
216AF211725  96+NoWPK4 protein kinase, induced by cytokinins, light and sucrose, from wheat
    (AB011670)
5e-8
223AF211732105+NoPolygalacturonase 1 β chain from tomato (M98466)3e-10
228AF211736174+NoAuxin-induced protein 15A from soybean (S44172)1e-13
231AF211738150+NoHypothetical protein predicted from genome sequence of Arabidopsis
    (AC002396)
3e-7
236AF211741104+NoSerine/threonine protein kinase from Arabidopsis (AL022603)2e-4
246AF211749118+NoPutative host response protein from Arabidopsis (AL049481)5e-6
256AF211758147+NoReceptor-like protein kinase from Arabidopsis (M84658)5e-7
258AF211760154NoProton-ATPase β subunit from tobacco (X61319)3e-22
264AF211766131+NoPutative protein kinase from Arabidopsis (AC005970)2e-12
267AF211767106+NoPutative protein predicted from genome sequence of Arabidopsis (AL021749)6e-4
284AF211780136+NoProtein phosphatase 2C from alfalfa (Y11607)2e-15
288AF211784158+NoExpressed sequence tags similar to glycosyl transferases from Arabidopsis
    (AC002062)
2e-14
  • a Induction (+) or repression (–) by Avr9.

  • b GenBank accession numbers of sequences homologous to AFLP fragment are in parentheses.

  • c All are BLASTX scores except for 105 and 110, which are BLASTN scores.