Table 3.

ABRE, DRE, and CCGAC Core Sequences Observed in the Promoter Regions of the DREB1A Target Genes Identified by cDNA Microarray Analysisa

GeneABRE (PyACGTG (T/G) C)DRE (TACCGACAT)CCGAC Core Motif (CCGAC)
rd29A TACGTGTC (–45 to –38)bTACCGACAT (–148 to –140)AGCCGACAC (–111 to –103)
TACCGACAT (–206 to –198)GACCGACTA (–256 to –248)
cor15a CACGTGGC (–132 to –125)GGCCGACCT (–184 to –176)
GGCCGACAT (–361 to –353)
AACCGACAA (–416 to –424)
kin1 TACCGACAT (–120 to –112)ATCCGACAT (–720 to –712)
kin2 CACGTGGC (–68 to –61)TACCGACAT (–127 to –119)CCCCGACGC (–403 to –395)
rd17 TACGTGTC (–920 to –913)TACCGACTT (–162 to –154)
AGCCGACCA (–967 to –959)
GACCGACAT (–997 to –989)
erd10 CACGTGGC (–838 to –831)GACCGACGT (–198 to –190)c
GACCGACCG (–202 to –194)c
CACCGACCG (–206 to –198)c
GACCGACAT (–999 to –991)
FL3-5A3CACGTGGC (–74 to –67)TACCGACAT (–415 to –407)TGCCGACAT (–806 to –798)
FL3-27TACCGACAT (–89 to –91)
FL5-2122TACCGACTC (–191 to –183)
TACCGACTA (–266 to –258)
TGCCGACCT (–418 to –410)
ACCCGACTA (–695 to –703)
GACCGACGT (–786 to –778)
FL5-77CCCCGACTA (–315 to –307)
FL5-94TACCGACTA (–190 to –198)
TTCCGACTA (–260 to –268)
ATCCGACGC (–630 to –622)
  • a ABRE, DRE, and CCGAC core sequences observed in 1000-bp upstream regions of the 5′ termini of the longest cDNA clones isolated are listed.

  • b Numbers in parentheses indicate the nucleotide beginning at the 5′ terminus of the longest cDNA clone isolated. Minus signs indicate that the nucleotide exists upstream of the 5′ terminus of the putative transcription start site.

  • c These 9-bp sequences that contain a CCGAC core motif overlap each other.