Table 1.

Characteristics of All 61 Core Cell Cycle Genes in Arabidopsis

GeneChromosomeStartaStopbStrandStatuscFeaturesdOpen Reading Frame Name
Arath;CDKA;1318,368,30318,370,279+EXPPSTAIREAT3g48750
Arath;CDKB1;1320,355,86120,357,226+EXPPPTALREAT3g54180
Arath;CDKB1;2216,301,44616,302,758+EXPPPTALREAT2g38620
Arath;CDKB2;1128,430,92328,429,129EXPPSTTLREAT1g76540
Arath;CDKB2;217,294,6797,292,770EXPPPTTLREAT1g20930
Arath;CDKC;153,224,6793,221,723AI993037PITAIREAT5g10270
Arath;CDKC;2525,955,46025,958,387+AV439592PITAIREAT5g64960
Arath;CDKD;1127,423,79227,425,694+PREDNVTALREAT1g73690
Arath;CDKD;2124,603,46124,605,698+AV554642NFTALREAT1g66750
Arath;CDKD;316,206,8886,209,316AF344314NITALREAT1g18040
Arath;CDKE;1525,465,02125,463,612BG459367SPTAIREAT5g63610
Arath;CDKF;1413,494,33013,495,958+EXPNoneAT4g28980
Arath;CYCA1;1116,354,76216,352,618AV556475LVEVxEEYAT1g44110
Arath;CYCA1;2128,792,71028,790,480PREDLVEVxEEYAT1g77390
Arath;CYCA2;158,885,6578,887,990+EXPLVEVxEEYAT5g25380
Arath;CYCA2;253,604,4723,601,820EXPLVEVxDDYAT5g11300
Arath;CYCA2;315,363,0545,365,235+EXPeLVEVxEEYAT1g15570
Arath;CYCA2;4129,923,26629,925,430+AV558333LVEVxEEYAT1g80370
Arath;CYCA3;1517,293,19317,294,681+PREDLVEVxEEYAT5g43080
Arath;CYCA3;2117,022,21217,023,757+AT50514LVEVxEEYAT1g47210
Arath;CYCA3;3117,024,85217,026,370+PREDLVEVxEEYAT1g47220
Arath;CYCA3;4117,027,92717,029,762+PREDLVEVxEEYAT1g47230
Arath;CYCB1;1416,830,05116,827,976EXPHxRFAT4g37490
Arath;CYCB1;251,861,5771,859,551EXPHxKFAT5g06150
Arath;CYCB1;333,627,1503,625,489EXPfHxKFAT3g11520
Arath;CYCB1;4211,548,85011,552,088+PREDHxKFAT2g26760
Arath;CYCB2;127,813,0507,815,144+EXPHxKFAT2g17620
Arath;CYCB2;2416,107,59816,109,617+EXPHxKFAT4g35620
Arath;CYCB2;317,137,2887,135,091PREDHxKFAT1g20610
Arath;CYCB2;4128,338,77228,336,622PREDHxKFAT1g76310
Arath;CYCB3;115,584,4765,582,409PREDHxKFAT1g16330
Arath;CYCD1;1126,148,70226,150,664+EXPLxCxEAT1g70210
Arath;CYCD2;129,704,7579,703,043EXPLxCxEAT2g22490
Arath;CYCD3;1415,563,75815,565,156+EXPLxCxEAT4g34160
Arath;CYCD3;2526,836,27726,837,626+AI995751LxCxEAT5g67260
Arath;CYCD3;3318,862,63218,861,289AV527915LxCxEAT3g50070
Arath;CYCD4;1526,143,71326,141,558EXPLxCxEAT5g65420
Arath;CYCD4;253,282,3473,280,801+PREDno LxCxEAT5g10440
Arath;CYCD5;1416,885,34116,886,338+AI998509LFLCxEAT4g37630
Arath;CYCD6;141,432,4971,431,184PREDno LxCxEAT4g03270
Arath;CYCD7;15417,084418,547+PREDLxCxEAT5g02110
Arath;CYCH;159,813,1619,816,075+AV560893NoneAT5g27620
Arath;CKS1212,060,43012,059,793EXPNoneAT2g27960
Arath;CKS2212,061,99912,061,350AV553882NoneAT2g27970
Arath;DEL1318,079,60718,081,809+EXPNoneAT3g48160
Arath;DEL254,858,6404,861,044+PREDNoneAT5g14960
Arath;DEL33126,812124,606EXPNoneAT3g01330
Arath;DPa5544,155844,977EXPNoneAT5g02470
Arath;DPb5842,841845,196+EXPNoneAT5g03410
Arath;E2Fa215,268,58215,271,784+EXPNoneAT2g36010
Arath;E2Fb57,431,8267,434,541+EXPNoneAT5g22220
Arath;E2Fc117,356,11317,358,730+EXPNoneAT1g47870
Arath;KRP1210,126,80610,125,908EXPNoneAT2g23430
Arath;KRP2319,096,47019,097,325+EXPNoneAT3g50630
Arath;KRP3519,794,31019,792,575EXPNoneAT5g48820
Arath;KRP4214,022,38714,024,238+EXPNoneAT2g32710
Arath;KRP539,060,9059,061,654+EXPNoneAT3g24810
Arath;KRP636,617,5976,616,567EXPNoneAT3g19150
Arath;KRP7118,087,62518,086,761EXPNoneAT1g49620
Arath;Rb33,919,3443,913,685AF245395NoneAT3g12280
Arath;WEE11673,409676,125+EXPgNoneAT1g02970
  • a Position of start codon on the chromosome.

  • b Position of stop codon on the chromosome.

  • c Expression status of the gene. EXP, experimentally characterized; PRED, prediction. Numbers are EST accession numbers.

  • d Family-specific protein signatures.

  • e EST BE528080 found for the first exon completes the structural annotation.

  • f Gene structure was determined using partial mRNA L27224 and AV546264.

  • g Gene structure was determined using two cDNA sequences, confirming the manual annotation.