Table 1.

Summary of the AtBHLH Genes Detected

Species aGeneric
 NameAGI Gene
 CodeEntry
 Number bSynonym(s)Accession
 Number cReferenced
AtBHLH001At5g4131531GL3AF246291Payne et al., 2000
AtBHLH002At1g6365030EGL1/EGL3/AtMYC146AF027732Zhang et al., 2003
AtBHLH003At4g1643034AF251688
AtBHLH004At4g1788037AtMYC4AF251689Abe et al., 2003
AtBHLH005At5g4676036ATR2/AtMYC3AF251690Smolen et al., 2002
AtBHLH006At1g3264038AtMYC2/RAP1X99548Abe et al., 2003
AtBHLH007At1g0304092AF251692
AtBHLH008At1g09530100PIF3AF251693Ni et al., 1998
AtBHLH009At2g43010102PIF4AF251694Huq and Quail, 2002
AtBHLH010At2g3122023AF251695
AtBHLH011At4g36060137AF251696
AtBHLH012At4g0048058AtMYC1AF251697Urao et al., 1996
AtBHLH013At1g0126039Myc7EAY120752GenBank entrye
AtBHLH014At4g0087033AJ519812
AtBHLH015At2g20180101PIL5AF488560Yamashino et al., 2003
AtBHLH016At4g00050108AF488561
AtBHLH017At2g4651035AY094399
AtBHLH018At2g2275028AF488562
AtBHLH019At2g2276026AF488563
AtBHLH020At2g2277027AF488564
AtBHLH021At2g1691048AMSAF488565Sorensen et al., 2003
AtBHLH022At4g2133049NM_118253
AtBHLH023At4g28790107AF488566
AtBHLH024At4g3693099SPATULAAF319540Heisler et al., 2001
AtBHLH025At4g3785029AF488567
AtBHLH026At1g0234068HFR1AF488568Fairchild et al., 2000
AtBHLH027At4g2993042AF488569
AtBHLH028At5g4683040AF252636
AtBHLH029At2g2816043AF488570
AtBHLH030At1g6881053AY072161
AtBHLH031At1g5964088ZCW32AB028232GenBank entrye
AtBHLH032At3g2571054AF488571
AtBHLH033At1g1286044AF488572
AtBHLH034At3g23210135AF488573
AtBHLH035At5g5715041AF488574
AtBHLH036At5g517806AF488575
AtBHLH037At3g50330117NM_114893
AtBHLH038At3g569708ORG2AF488576Kang et al., 2003
AtBHLH039At3g569809ORG3AF488577Kang et al., 2003
AtBHLH040At4g00120120AF488578
AtBHLH041At5g5696051NM_125078
AtBHLH042At4g0982032TT8AJ277509Nesi et al., 2000
AtBHLH043At5g09750119NM_121012
AtBHLH044At1g1840077BEE1AF488579Friedrichsen et al., 2002
AtBHLH045At3g0612020AF488580
AtBHLH046At5g08130126AF488581
AtBHLH047At3g47640139AF488582
AtBHLH048At2g4230097AF488583
AtBHLH049At1g6892082AF488584
AtBHLH050At1g7383076BEE3AF488585Friedrichsen et al., 2002
AtBHLH059At4g0259093AF488592
AtBHLH060At3g5780091AF488593
AtBHLH061At5g1057046AF488594
AtBHLH062At3g0734085AF488595
AtBHLH063At4g3453084AF488596
AtBHLH064At2g1830079AF488597
AtBHLH065At3g59060103PIL6AF488598Yamashino et al., 2003
AtBHLH066At2g2426095AF488599
AtBHLH067At3g6195011AF488600
AtBHLH068At4g2910060AF488634
AtBHLH069At4g3098094AF488601
AtBHLH070At2g4681013AF488602
AtBHLH071At5g4669017AF488603
AtBHLH072At5g61270109AF488604
AtBHLH073At5g6711098ALCATRAZAF488605Rajani and Sundaresan, 2001
AtBHLH074At1g1012090AF488606
AtBHLH075At1g2533078AF488607
AtBHLH076At1g2626083AF488608
AtBHLH077At3g2369087AF488609
AtBHLH078At5g4856086AF488610
AtBHLH079At5g6261081AF488611
AtBHLH080At1g3546071AF488612
AtBHLH081At4g0918072AF488613
AtBHLH082At5g5801096AF488614
AtBHLH083At1g66470112AF488615
AtBHLH084At2g14760AJ577584
AtBHLH085At4g33880115AF488616
AtBHLH086At5g37800113NM_123139
AtBHLH087At3g21330121AF488617
AtBHLH088At5g67060118AF488618
AtBHLH089At1g0617024AF488619
AtBHLH090At1g1061050AF488620
AtBHLH091At2g3121025AJ519809
AtBHLH092At5g4365022AY065390
AtBHLH093At5g6564047AF488621
AtBHLH094At1g2249016AF488622
AtBHLH095At1g4977021AF488623
AtBHLH096At1g7221015AJ459771
AtBHLH097At3g2414014AF488624
AtBHLH098At5g5321019NM_124700
AtBHLH099At5g6532018AF488625
AtBHLH100At2g412407AF488626
AtBHLH101At5g0415010AJ519810
AtBHLH102At1g69010125AF488627
AtBHLH103At4g2134062AY065362
AtBHLH104At4g14410136AF488628
AtBHLH105At5g54680133AF488629
AtBHLH106At2g4113056AY074639
AtBHLH107At3g5677055NM_115536
AtBHLH108At1g25310132NM_102341
AtBHLH109At1g68240AJ577585
AtBHLH110At1g2766059NM_102531
AtBHLH111At1g3105066AA395190
AtBHLH112At1g6166064AF488630
AtBHLH113At3g1950061AF488631
AtBHLH114At4g0517065NM_116756
AtBHLH115At1g51070134AF488632
AtBHLH116At3g2674445ICE1AY079016Chinnusamy et al., 2003
AtBHLH117At3g22100140NM_113106
AtBHLH118At4g254005NM_118672
AtBHLH119At4g28811104AJ519811
AtBHLH120At5g517904NM_124558
AtBHLH121At3g19860138AF488633
AtBHLH122At1g5114070AY063120
AtBHLH123At3g2064063AU238908
AtBHLH124At2g46970110PIL1AB090873Yamashino et al., 2003
AtBHLH125At1g629752AF506369
AtBHLH126At4g254103Z46563
AtBHLH127At4g28815AJ577586
AtBHLH128At1g0580574AY045907
AtBHLH129At2g4314073AU237473
AtBHLH130At2g4228069NM_129790
AtBHLH131At4g38071AJ577587
AtBHLH132At3g62090111PIL2AB090874Yamashino et al., 2003
AtBHLH133At2g20095AJ577588
AtBHLH134At5g1516052AK118887
AtBHLH135At1g7450067AY088286
AtBHLH136At5g39860AY088246
AtBHLH137At5g5091589AY087602
AtBHLH138At2g31215NM_179830
AtBHLH139At5g43175116NM_148080
AtBHLH140At5g01310122NM_120209
AtBHLH141At5g38860127NM_123247
AtBHLH142At5g64340128AY062561
AtBHLH143At5g09460129BT000009
AtBHLH144At1g29950130AF361607
AtBHLH145At5g50010131BT005301
AtBHLH146At4g30180141AU237244
AtBHLH147At3g17100142NM_180270
AtBHLH148At3g06590143NM_111535
AtBHLH149At1g09250144BT003052
AtBHLH150At3g05800145NM_111454
AtBHLH151At2g47270146NM_130295
AtBHLH152At1g22380147NM_102088
AtBHLH153At1g05710AJ576040
AtBHLH154At2g31730AJ576041
AtBHLH155At2g31280AJ576042
AtBHLH156At2g27230AJ576043
AtBHLH157At1g64625AJ576044
AtBHLH158At2g43060AJ576045
AtBHLH159At4g30410AJ576046
AtBHLH160At1g71200NM_105789
AtBHLH161At3g47710NM_114639
AtBHLH162At4g20970NM_118215
  • a The prefix At indicates Arabidopsis thaliana (see text).

  • b BHLH “entry numbers” (Toledo-Ortiz et al., 2003).

  • c GenBank accession number of the cDNA sequence representing the open reading frame used to evaluate the presence or absence of a proper bHLH domain signature.

  • d References for the synonyms that are used in the literature.

  • e The synonym was found only in a GenBank entry but not in an article.