Table 4.

Fold Variations of UPR-Downregulated Genes

TunicamycinDTT
AGI GeneBACAffymetrix CodeDescription02+25+502+25+5
Secretory pathway
Extracellular or cell wall related
 At3g14310MLN21.1012338_atPectin methylesterase, PM31.10.41.00.31.11.00.11.20.11.0
 At2g38540T6A23.2612754_g_atNonspecific lipid transfer protein1.00.81.00.31.31.10.31.20.21.0
 At2g45470F4L23.212787_atEndosperm-specific/arabinogalactan-like1.10.61.00.31.21.10.11.10.11.0
 At1g78820F9K20.1313085_i_at (D2T2)aSimilar to glycoprotein EP11.00.41.10.31.01.30.21.00.21.2
 At4g38770T9A14.5013120_atProline-rich protein1.00.51.20.21.01.20.21.00.11.0
 At2g04160F3L12.214025_s_atSubtilisin-like protease, AIR31.30.41.00.81.41.30.31.00.71.3
 At1g72610F28P22.2014726_s_atGermin-like protein1.00.31.10.41.11.00.11.10.11.0
 At2g05540T20G20.1115910_atPutative glycine-rich protein0.81.01.10.41.31.11.01.00.42.3
 At2g38530T6A23.2716432_g_at (D2T2)aPutative nonspecific lipid-transfer protein1.00.61.00.21.31.00.11.20.11.0
 At1g70370F17O7.916598_s_atPolygalacturonase isoenzyme1 β-subunit
   homolog1.00.61.30.41.01.00.41.20.31.4
 At2g21140F26H11.1017386_atPutative proline-rich protein1.00.71.10.41.21.00.21.00.11.2
 At5g18280MRG7.2417589_atApyrase, membrane-associated protein0.90.21.81.01.21.20.21.00.61.2
 At1g62510T3P18.718560_atSimilar to 14K-D proline-rich protein1.30.71.00.21.21.40.31.00.11.3
 At4g12550T1P17.14019118_s_at (D2T2)aCell wall membrane disconnected CLCT,
   AIR1A1.00.51.60.42.11.60.21.30.11.0
 At2g15050T15J14.919548_atPutative lipid transfer protein1.20.51.40.41.01.00.11.20.21.4
 At3g13790MMM17.2620239_g_atβ-Fructofuranosidase11.70.31.01.01.32.40.31.20.91.0
Membrane related
 At2g28630T8O18.812577_atPutative fatty acid elongase1.00.51.60.31.51.80.61.00.22.8
 At1g68530T26J14.1015642_atVery-long-chain fatty acid condensing
   enzyme CUT11.10.51.10.31.01.00.31.00.21.1
 At4g23400F16G20.10017931_atPiP1-51.00.31.10.61.01.10.41.00.11.4
Unclassified
 At4g21960T8O5.17012752_s_atPeroxidase prxr1 or p421.10.51.00.21.01.10.11.20.01.0
 At1g04030F21M11.313587_atSimilar to acid phosphatase1.20.61.10.21.01.20.21.20.01.0
 At3g32980T15D2.915969_s_atPeroxidase prxr3 or p321.00.31.10.31.31.50.11.30.01.0
 At4g26690T15N24.417897_atPutative kinase1.00.31.20.91.11.00.31.10.51.0
Unknown
 At2g25510F13B15.1716047_atUnknown protein1.30.41.00.31.41.60.71.10.21.0
 At1g70160F20P5.1218652_atUnknown protein1.00.31.10.41.01.10.21.00.41.2
Stress related
 At1g54000F15I1.812777_i_atMyrosinase-associated protein1.20.31.00.01.41.80.11.20.11.0
 At5g25610T14C9.15015776_atDehydration-induced protein RD221.30.71.40.21.01.10.21.00.11.3
 At1g54010F15I1.916493_atMyrosinase-associated protein1.00.71.20.41.41.20.11.00.21.0
Secretory nonrelated
At1g09750F21M12.1314018_atDNA binding protein1.00.51.00.31.01.00.11.60.11.3
At4g37470F6G17.12014080_atPutative β-ketoadipate enol-lactone
   hydrolase1.01.01.20.30.81.70.81.20.11.0
At4g00400F5I10.414469_atAcyltransferase domain1.00.72.10.21.61.10.01.10.11.0
  • a Numbers of replicas on the Affymetrix GeneChip for this gene meeting the restrictions in tunicamycin (T) and DTT (D) are shown in parentheses.

  • Repressed genes meeting the 1000-5P-0.4 criteria are boldface and those meeting the 1000-3P-0.5 criteria are italicized boldface.