Table 1.

Expression of Genes Related to Nitrogen Metabolism and Ion Transport in Col and chl1-5 Roots

GeneSAGE Tag (5′/3′)Tag Copy Number in ColTag Copy Number in chl1-5ProbabilityFunction
At5g07440GATCCAGATGCTGA2641.27E-05Glu dehydrogenase (GDH2)
At5g54810GATCGGTGTGGAAG2976.07E-05Trp synthase TSB1 (β subunit)
At5g17330GATCGATATAGAGA1004.88E-04Glu decarboxylase (GAD1)
At5g18170GATCTCCGGATGGG909.76E-04Glu dehydrogenase (GDH1)
At5g19550GATCTACCGTTTCT8198.27E-03Asp aminotransferase (ASP2)
At5g11520GATCGTATCATCAG710.015Asp aminotransferase (ASP3)
At3g47340GATCGATGTACATC040.031Asn synthetase (ASN1)
At2g37170GATCCTTCAGAAGT2958.09E-06Aquaporin (PIP2;2)
At2g45960GATCTTCGCTCTCG43131.31E-05Aquaporin (PIP1;2)
At1g32450GATCAGTCTTTTTC2231.83E-04Nitrate/peptide transporter, putative
At1g08090GATCGCATATAAGA3183.17E-04Nitrate transporter (NRT2;1)
At3g02850GATCCAATTGGTAG703.91E-03Stelar K+ channel (SKOR)
At4g17340GATCAATCCTATAG0104.88E-04Aquaporin (TIP2;2)
At4g19690GATCTATCACATTT914.88E-03Fe transporter (IRT1)
At1g80830GATCTTCGTAGGAA607.81E-03Metal ion transporter (NRAMP1)
At3g53420GATCTCTCTGTACA27150.011Aquaporin (PIP2;1)
At5g13750GATCCAAAGTTAGA500.015Transporter-like protein
At5g14040GATCGGGACGTTGA170.016Mitochondrial phosphate translocator
At1g78000GATCCAGAGATGGC1030.017Sulphate transporter (Sultr1;2)
At3g61430GATCTACTACATGT26170.024Aquaporin (PIP1;1)
At4g38250GATCAGCTCTGTCT160.027Putative amino acid transporter
At5g49630GATCAGTGCAAGGA150.047Amino acid transporter (AAP6)