Table 1.

Microarray Analysis of Genes Modulated upon ODO1 Suppression in RNAi Line 3a

Accession NumberbAnnotationBLAST E-ValueRatioP-Valuec
AF082893Met synthase1E-128−2.50.000
CAB78435Hydroxymethyltransferase1E-134−2.00.003
M18745Sucrose synthase1E-132−1.80.017
BAA03709S-adenosyl-l-homocysteine hydrolase1E-141−1.60.000
AF452015Aquaporin-like protein TIP1;10−1.60.000
Z11889Mitochondrion rrn26 gene for rRNA large subunit (26S)1E-102−1.60.000
M21084EPSP synthase0−1.60.009
X82214S-adenosylmethionine-synthetase1E-156−1.60.000
AY705977ODO10−1.60.005
NM_130144DEAD/DEAH box helicase1E-54−1.50.000
CO805162DAHP synthase0−1.50.001
U31094P21 Thiol protease homolog1E-1381.50.001
NM_127325Arabidopsis expressed protein1E-181.60.008
U12439Abscisic stress ripening-related protein4E-461.60.000
AF349916Short chain–type alcohol dehydrogenase3E-991.60.002
AY171099Cys protease5E-971.80.018
Y12689Isoflavone reductase-like5E-751.80.014
NM_120336Arabidopsis expressed protein1E-181.80.000
NM_123585C3HC4-type zinc finger protein9E-251.90.000
AY611496BPBT01.90.000
NM_113287NAD-dependent epimerase-dehydratase protein2E-562.10.000
NM_122675Protein Phosphatase 2C5E-952.20.001
AY233465BSMT102.50.000
AK10885Peroxidase2E-294.40.002
  • a Sequenced cDNAs from the dedicated microarray that were upregulated or downregulated by 1.5-fold are shown.

  • b Corresponding GenBank accession numbers with the highest similarity are shown.

  • c P-values (adjusted for multiple testing) denote the significant difference in the average ratios (Ratio) of ODO1-suppressed plants over wild-type Mitchell plants in three independent experiments.