Table 1.

Set of 103 UV-B–Induced Genes That Are Blocked in Both cop1-4 and hy5-1 Mutants (Corresponding to Figure 2D)

Colcop1Lerhy5
Probe NameGene NameExpr.FoldExpr.FoldExpr.FoldExpr.FoldDescription
245560_atAt4g154801288.6731.06814.9361.1UDP-glucoronosyl/UDP-glucosyl transferase family (UGT84A1)
245126_atAt2g474601414.773−1.11095.2211.2myb family transcription factor (MYB12)
260773_atAt1g78440264.621−1.1434.0181.0Gibberellin 2-oxidase/GA2-oxidase (GA2OX1)
260784_atAt1g061801344.571−1.11254.3802.2myb family transcription factor (MYB13)
254459_atAt4g21200314.444−1.3313.6171.0Oxidoreductase, 2OG-Fe(II) oxygenase family protein
249063_atAt5g441108684.3789−1.19944.71921.3ABC transporter family protein (NAP2/POP1)
246966_atAt5g248501804.1155−1.11504.1421.6Cryptochrome 3/dash (CRY3/CRYD)
248596_atAt5g49330944.1192−1.9703.974−1.9myb family transcription factor (MYB111)
251605_atAt3g57830654.159−1.1705.2781.9Leu-rich repeat transmembrane protein kinase, putative
264752_atAt1g23010834.0581.0563.516−1.1Multicopper oxidase type I family protein
265634_atAt2g255301764.01331.01424.1891.1AFG1-like ATPase family protein
257176_s_atNo gene4393.8280−1.14143.62921.0Cyclopropane fatty acid synthase, putative (At3g23510/At3g23530)
258167_atAt3g215607663.5730−1.211143.33581.0UDP-glucosyltransferase, putative (UGT84A2)
247463_atAt5g622101733.44061.11133.167−1.3Embryo-specific protein-related (ATS3)
251084_atAt5g015201373.3731.21293.1751.1Zinc finger (C3HC4-type RING finger) family protein
264906_atAt2g17270673.3521.1605.3441.3Mitochondrial substrate carrier family protein
249622_atAt5g37550853.161−1.1823.3221.3Expressed protein
255594_atAt4g016603173.13691.12762.81641.0ABC1 family (ATH10)
260146_atAt1g52770293.1501.1302.3351.2Phototropic-responsive NPH3 family protein
250794_atAt5g052703803.0330−1.12152.81341.1Chalcone-flavanone isomerase family protein (CHI-like)
258947_atAt3g01830123.0121.1124.4102.7Calmodulin-related, putative
265665_atAt2g274201213.0106−1.1883.11182.3Cys proteinase, putative
248049_atAt5g560901622.91701.01662.9911.0Cytochrome oxidase assembly family protein
250882_atAt5g04000312.9211.1272.7151.1Expressed protein
251984_atAt3g5326019712.913791.19232.59271.4Phe ammonia-lyase 2 (PAL2)
264637_atAt1g655601192.9146−1.1682.7671.1Allyl alcohol dehydrogenase, putative
266578_atAt2g239103312.9366−1.21433.3251.5Cinnamoyl-CoA reductase-related
259432_atAt1g01520242.8151.1682.6352.2myb family transcription factor
262853_atAt1g208901102.8113−1.11152.189−1.1Expressed protein
265290_atAt2g22590942.8411.2415.4221.2Glycosyltransferase family protein (UGT91A1)
256296_atAt1g69480302.7231.2472.2431.0EXS family/ERD1/XPR1/SYG1 family protein
248204_atAt5g542801462.6851.11702.11481.4Myosin heavy chain, putative
249677_atAt5g3597023612.612631.024722.314261.6DNA binding protein, putative
261064_atAt1g075102832.62501.03032.72751.1FtsH protease, putative (FtsH10)
265886_atAt2g25620972.6109−1.11272.687−1.2Protein phosphatase 2C, putative
250533_atAt5g0864014532.51476−1.28683.21391.1Flavonol synthase 1 (FLS1)
251827_atAt3g551209022.58521.07382.63751.0Chalcone-flavanone isomerase/chalcone isomerase (CHI/TT5)
256186_atAt1g5168013842.55811.012051.91235−1.14-Coumarate–CoA ligase 1/4-coumaroyl-CoA synthase 1 (4CL1)
258023_atAt3g194508092.55931.07232.46571.5Cinnamyl-alcohol dehydrogenase (CAD)
245101_atAt2g4089010842.46981.09891.711011.0Cytochrome P450 98A3, putative (CYP98A3)
246200_atAt4g372401042.41031.2892.271−1.1Expressed protein
250049_atAt5g177802042.41641.01482.8751.0Hydrolase, α/β fold family protein
251895_atAt3g544202402.41601.31683.92051.3Class IV chitinase (CHIV)
252383_atAt3g47780742.4601.1592.4881.3ABC transporter family protein (ATH6)
252652_atAt3g447203132.41921.11523.01461.6Prephenate dehydratase family protein
257081_atAt3g30460692.41001.0623.7581.3Zinc finger (C3HC4-type RING finger) family protein
257595_atAt3g24750142.414−1.1154.315−1.1Expressed protein
258227_atAt3g15620472.4521.0432.036−1.26-4 Photolyase (UVR3)
260336_atAt1g739905862.4624−1.16592.63771.1Peptidase U7 family protein (SppA)
260955_atAt1g060005932.44761.03082.82021.0UDP-glucoronosyl/UDP-glucosyl transferase family (UGT89C1)
261607_atAt1g496603802.43641.02061.91421.2Carbohydrate esterase family 10 protein
261907_atAt1g650606592.4427−1.33082.7125−1.34-Coumarate–CoA ligase 3/4-coumaroyl-CoA synthase 3 (4CL3)
263845_atAt2g3704020742.412501.015322.512401.0Phe ammonia-lyase 1 (PAL1)
247751_atAt5g59050802.3501.11071.8851.3Expressed protein
253219_atAt4g34990972.374−1.4831.557−1.1myb family transcription factor (MYB32)
253879_s_atNo gene4292.34061.02952.4831.1Glycosyltransferase (At4g27560/UGT79B2; At4g27570/UGT79B3)
263796_atAt2g245402112.3113−1.12682.11481.9Kelch repeat-containing F-box family protein
265732_atAt2g01300472.3411.5431.3611.1Expressed protein
266532_atAt2g16890692.369−1.2581.9401.0UDP-glucoronosyl/UDP-glucosyl transferase family (UGT90A1)
246214_atAt4g369901882.21471.13121.72001.1Heat shock transcription factor 4 (HSF4)
249071_atAt5g440501502.2931.11172.0114−1.5MATE efflux family protein
250207_atAt5g1393031052.237721.025622.47111.0Chalcone synthase/naringenin-chalcone synthase (CHS/TT4)
252010_atAt3g527401872.2243−1.22442.61131.1Expressed protein
255011_atAt4g100404082.23911.25132.15091.1Cytochrome c, putative
257147_atAt3g272701172.2821.11371.41391.0Expressed protein
264148_atAt1g02220552.2501.1422.3371.0No apical meristem (NAM) family protein
265318_atAt2g226501852.21231.01221.71001.1FAD-dependent oxidoreductase family protein
266204_atAt2g02410362.2331.1392.3321.2Expressed protein
266555_atAt2g462701112.2651.01481.9881.1G-box binding factor 3 (GBF3/bZIP55)
267070_atAt2g41000862.2731.01002.2411.3DNAJ heat shock N-terminal domain-containing protein
267470_atAt2g3049018192.213851.015142.213551.2Cinnamic acid 4-hydroxylase/cytochrome P450 (C4H/CYP73A5)
245113_atAt2g416601642.11871.03151.7145−1.4Expressed protein
245895_atAt5g092303232.12931.03502.32251.1Transcriptional regulator Sir2 family protein
248199_atAt5g541703142.13751.52661.83511.6Expressed protein
253922_atAt4g2685021402.11787−1.217752.724191.5Expressed protein
254210_atAt4g23450592.138−1.11041.655−1.1Zinc finger (C3HC4-type RING finger) family protein
256451_s_atNo gene1352.11021.11881.91711.1SEC14 cytosolic factor family protein (At1g75170/At5g04780)
256751_atAt3g271702832.1167−1.12981.9239−1.2Chloride channel protein (CLC-b)
256816_atAt3g214001362.11351.11262.3112−1.1Expressed protein
258315_atAt3g16175532.1281.0752.0711.5Thioesterase family protein
259076_atAt3g02140262.1481.4433.8481.6Expressed protein
267624_atAt2g396602502.14271.22601.83251.4Protein kinase, putative
245090_atAt2g409001902.01591.02271.6273−1.3Nodulin MtN21 family protein
246017_atAt5g107302092.01991.01952.21691.0Expressed protein
247779_atAt5g587601342.073−1.11742.7591.6WD40 repeat family protein
248436_atAt5g512202952.03191.02882.02601.1Ubiquinol-cytochrome c chaperone family protein
250028_atAt5g181302072.01321.42612.01631.1Expressed protein
250350_atAt5g120104252.03211.05342.04551.0Expressed protein
255259_atAt4g050202032.01371.22812.24111.2NADH dehydrogenase-related
257212_atAt3g150902402.0212−1.12722.01231.2Oxidoreductase, zinc binding dehydrogenase family protein
258752_atAt3g09520542.0671.2721.8791.1Exocyst subunit EXO70 family protein
260153_atAt1g527605942.0409−1.12311.4254−1.4Esterase/lipase/thioesterase family protein
247716_atAt5g593502541.9194−1.13482.02991.5Expressed protein
247955_atAt5g569503211.9327−1.11302.1971.2Nucleosome assembly protein (NAP), putative
262945_atAt1g795106081.96591.07062.05181.4Expressed protein
263787_atAt2g464203291.9238−1.13372.1155−1.1Expressed protein
247946_atAt5g571803511.82831.13062.13351.8Expressed protein
256140_atAt1g486503221.73041.02612.22481.2Helicase domain-containing protein
259952_atAt1g714001511.51781.31092.31031.5Disease resistance family protein/LRR family protein
263403_atAt2g040401131.51601.4473.2942.2MATE efflux family protein
265193_atAt1g050703621.43451.03982.23501.3Expressed protein
266732_atAt2g032401921.41621.12502.11991.0EXS family protein/ERD1/XPR1/SYG1 family protein
264261_atAt1g092403741.39031.01372.4551−1.1Nicotianamine synthase, putative
  • All data shown are from two biological replicates. Control expression level (Expr.) is the average of two array hybridizations under a 327-nm cutoff filter (i.e. −UV-B control). Fold induction (Fold) depicts the ratio of expression levels +UV-B/−UV-B (i.e., WG305/WG327).