Table 1.

Qualitative Analysis of Expression in Arabidopsis

GeneNo.mRNAIMEterRiceReference
RHD3 (At3g13870)1+7163Wang et al. (2002)
Histone H3 (At4g40040)1+8274Chaubet-Gigot et al. (2001)
Histone H3 (At4g40030)1+6365Chaubet-Gigot et al. (2001)
EF-1α A1 (At1g07920)1+10072Curie et al. (1993)
EF-1α A3 (At1g07940)1+5248Chung et al. (2006)
eEF-1β (At2g18110)1+−4−10Gidekel et al. (1996)
TWN2 (At1g14610)a1+2017Zhang and Somerville (1997)
TWN2 (At1g14610)a2+27−8Zhang and Somerville (1997)
Cox5c-1 (At2g47380)1+6068Curi et al. (2005)
Cox5c-2 (At3g62400)1+4635Curi et al. (2005)
ACT1 (At2g37620)1+414Vitale et al. (2003)
KC01 (At5g55630)1+8−14Czempinski et al. (2002)
PRF1 (At2g19760)1+5063Jeong et al. (2006)
PRF2 (At4g29350)1+4928Jeong et al. (2006)
PRF3 (At5g56600)11021Jeong et al. (2006)
PRF4 (At4g29340)117−1Jeong et al. (2006)
PRF5 (At2g19770)18−1Jeong et al. (2006)
ADF1 (At3g46010)1+6639Jeong et al. (2007)
FAD2 (At3g12120)1+8−32Kim et al. (2006)
SUVH3 (At1g73100)1+128Casas-Mollano et al. (2006)
SUVH3 (At1g73100)2−4−8Casas-Mollano et al. (2006)
ATMHX (At2g47600)1+3334David-Assael et al. (2006)
UBQ3 (At5g03240)1+5343Norris et al. (1993)
UBQ10 (At4g05320)b1+9768Norris et al. (1993)
ATPK1 (At3g08730)b1+5639Zhang et al. (1994)
TCH3 (At2g41100)b1−7−15Sistrunk et al. (1994)
COR15a (At2g42540)b2−223Baker et al. (1994)
  • No. indicates the intron number with respect to the 5′ end. The plus sign in the mRNA column indicates that the intron elevates expression. In the rice column, the IMEter was trained in rice.

  • a These two introns were not tested separately.

  • b These four introns are also included in Figure 2.