Table 1.

Examples of Genes Bound by LFY

GenePrimary Gene SymbolRankPOccBest Site
Flowering
 At5G03840underline>TFL1/underline>10.01803−13.60
 At2G45660underline>SOC1/underline>7700.0098−12.49
 At2G39250SCHNARCHZAPFEN10290.0070−13.95
 At3G58070GLABROUS INFLORESCENCE STEMS2590.0034−19.26
2880.0225−10.25
14820.0024−19.25
 At1G01183miR15680.0085−13.61
 At4G35900FD7960.0037−15.69
 At4G01500NGATHA47250.0081−13.49
 At1G25560TEM160.0048−17.12
4980.0026−19.40
 At4G25520SLK1680.0042−16.63
 At2G45190FILAMENTOUS FLOWER5030.0030−16.45
Floral meristem specification
 At5G61850LFY12690.0156−10.82
 At3G57130BOP11650.0476−7.82
14000.0026−18.83
 At2G41370BOP21660.0051−16.05
5560.0034−20.12
6710.0112−11.83
 At5G18560PUCHI5740.0046−18.27
Floral organ specification and development
 At1G69120APETALA1190.0609−7.33
12160.055−14.22
 At4G18960AG8880.0104−14.28
 At3G54320WRINKLED18150.0041−14.95
 At1G24260SEPALLATA3250.0096−16.15
8290.0023−20.59
 At2G03710SEPALLATA49830.0049−14.70
 At1G31140GORDITA14210.0403−8.20
 At5G02030PENNYWISE12210.0043−14.77
 At3G63530BIG BROTHER9400.0110−12.23
9890.0016−19.54
 At5G67060HECATE15270.0068−13.97
 At4G36260STYLISH 25200.0071−13.81
 At5G07280EMS17720.0044−14.70
 At3G02000ROXY13670.0084−14.60
 At2G28056miR17212130.0054−16.79
 At2G28610PRESSED FLOWER4240.0166−12.23
 At4G37750AINTEGUMENTA4620.0024−20.34
14600.0034−18.39
 At5G10510AINTEGUMENTA-like 616530.0056−14.89
 At1G01510ANGUSTIFOLIA 37230.0019−21.45
Gibberellins
 At5G15230GASA42310.0095−12.69
4310.0062−13.83
 At4G25420GA2OX114270.0086−13.52
 At1G30040GA2OX210450.0074−13.94
 At3G63010GID1B3500.0068−14.69
4250.0052−14.82
15360.0025−17.42
 At1G15550GA3OX1 (GA4)15730.0056−17.72
 At1G80340GA3OX28790.0052−15.90
Auxin
 At1G19840SAUR-like2630.0416−8.21
 At1G19850MONOPTEROS2890.0217−10.15
 At2G01420PIN42350.0029−17.34
9990.0053−15.03
 At3G62980TIR11000.0107−12.78
1100.0033−17.03
 At5G11320YUCCA45100.0061−15.82
12610.0055−14.73
 At1G04240SHY213500.0043−15.32
 At2G34650PINOID2250.0040−15.83
 At1G29430Auxin-responsive (SAUR-like)2120.0228−9.85
4380.0151−11.53
Cytokinins
 AT1G59940ARR310880.0204−10.13
  • For a selection of genes expressed in floral tissues or dependent on LFY, the table indicates the rank from the ChIP-seq experiments (Rank), the POcc value, and the score of the best LFY binding site. Binding profiles are shown in Figure 4 or Supplemental Figure 1 online for the genes with underlined names.