Table 4.

Enrichment of Annotated Promoter Motifs in Soil Drying Treatment Effect Genes as Estimated in Athena

ElementNo. of Genes with ElementP ValueElementNo. of Genes with ElementP Value
Spring
 Up (3527 Genes)Down (3207 Genes)
  ABRE-like*95410E-10 TATA262610E-6
  CACGTG motif*79210E-10 ATHB5ATCORE16710E-6
  ACGTABREMOTIF20SEM*73910E-10 UPRMOTIFIAT15610E-6
  GADOWNAT*43810E-10 TGA1*15610E-6
  ABRE*26910E-10 ATHB112410E-6
  ABF*18310E-8 ACGTABREMOTIF20SEM*58110E-5
  Evening element36210E-7 CARGCW8GAT205610E-5
  GBOXLERBCS*14510E-6 W-box218310E-5
  ABREATRD22*13510E-5 ABRE-like*79310E-4
  I-box147410E-4 L1-box63210E-4
Winter
 Up (2690 Genes)Down (2580 Genes)
  ACGTABREMOTIF20SEM*49610E-5 ABRE-like*80210E-10
  ABREATRD22*10910E-5 CACGTGMotif*60910E-10
  Evening element27510E-4 ACGTABREMOTIF20SEM*57810E-10
  ABRE*17910E-4 GADOWNAT*36010E-9
 W-box188610E-9
 ABRE*19510E-8
 MYCATERD1107710E-8
 AtMYC2 BS in RD22107710E-8
 GBF1/2/3 in ADH1*7810E-7
 CARGCW8GAT171310E-7
 TATA213910E-7
 TGA1*13110E-6
 UPRMOTIFIAT13110E-6
 GBOXLERBCS*11410E-6
 T-box149810E-6
 ABF*13810E-6
 UPRE2AT4010E-6
 I-box112910E-5
 RY repeat14310E-4
  • Asterisk indicates that the listed motif contains an ABRE core motif.