Table 3. Poly(A) Sites Seen Only in the Wild Type or oxt6 Mutant
PATaPACb
RegioncThe Wild Typeoxt6CommonThe Wild Typeoxt6Common
3′-UTR79,71737,7659,047,22015,3785,90916,543
Intergenic48,61425,34499,4787,9024,1511,596
Promoter20,09016,30461,7683,4491,853819
CDS5,37520,79353,5302,8183,066964
Intron6,6704,62516,4962,1951,037412
5′-UTR1,4881,91611,04520110054
Exon1,4211,2098,81528611294
Pseudogenic exon285693,024772629
AMB4,2062,489101,7921,018464763
Totals167,866110,5149,403,16833,32416,71821,274
  • a Total number of curated poly(A) site tags that map to the respective genomic regions.

  • b Total number of PACs that map to the respective genomic regions.

  • c Genomic region as defined in the TAIR9 database. Refer to Table 1 for details.