Table 1. Functional Categories of Genes Associated with IPA1 Binding Sites
Gene IDAnnotationLocations of IPA1 Binding Sitesa
SAsYPs
Transcription Factors
 LOC_Os03g49990SLR1PP
 LOC_Os07g39480WRKY78PP
 LOC_Os01g38530EF3NP
 LOC_Os06g06750MADS5NI
 LOC_Os08g41950MADS7NP, I
 LOC_Os02g52340MADS22NP
 LOC_Os03g49880TB1NP
 LOC_Os01g68370VP1NP
 LOC_Os07g25710PHR2NP
Plant Hormone–Related Genes
 LOC_Os02g36974GID2NP
 LOC_Os06g15620GSR1NP
 LOC_Os05g40384EUI1II
 LOC_Os01g40630LOGNP, I
 LOC_Os02g50960PIN1bNP
 LOC_Os01g49000DGL1NP
Enzymes
 LOC_Os11g09280PDIL1-1PP
 LOC_Os01g67420EG1 LikeNP
 LOC_Os06g24730NYC3NP
 LOC_Os09g12660APS1NP
 LOC_Os08g25734APS2NI
Transcriptional Regulators
 LOC_Os02g04160TEF1PP
 LOC_Os08g06480REL2PN
Others
 LOC_Os05g03430SIZ1PP
 LOC_Os03g11900MST4PN
 LOC_Os12g36030PMS3NP, I
 LOC_Os09g26999DEP1NP
 LOC_Os09g27060DDM1aNP
 LOC_Os12g17080OGR1NP
  • a P, promoter; I, first intron; N, no binding sites.