Table 2. De Novo Transcriptome Assembly Statistics
SpeciesRaw ReadsClean ReadsWord SizeContigsN50
S. moellendorffii63,151,67856,711,45940 (Single)44,564584
S. martensii90,146,30282,241,28740 (Paired)51,848557
S. kraussiana145,585,252135,198,96560 (Paired)44,996780
I. drummondii103,198,88468,341,13860 (Paired)264,900427
  • The number of contigs, number of raw and clean reads, the word size used to generate each assembly, and the N50 statistic (summary of the lengths of the longest contigs until 50% of the total contig length is reached) are shown.